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A1BJE7 (A1BJE7_CHLPD) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1098 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A1BJE7 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: 74A51524647689BB

FASTA1,098127,120
        10         20         30         40         50         60 
MYQPEALWYK DAIIYEAHVK TFYDSNNDGI GDFQGLRQKL GYLESLGITA IWLLPFYPSP 

        70         80         90        100        110        120 
LRDDGYDIAD YMKVNPDYGT LDDFREFLEE AHSRGLKVIT ELVVNHTSDQ HAWFQRARRA 

       130        140        150        160        170        180 
PVGSPERNFY VWSDDPNKYS ETRIIFQDFE ASNWTYDPVA GQYFWHRFYH HQPDLNFENP 

       190        200        210        220        230        240 
EVHQALFDVL DFWLGMGVDG LRLDAVPYLY EAEGTNCENL PQTYEYLKSL RSYVDEHYPN 

       250        260        270        280        290        300 
RMLLAEANQW PEDAAAYFGN GDQCHMNFHF PLMPRMYMAL ATEDRFPLLD ILDQTPDIPE 

       310        320        330        340        350        360 
NCQWASFLRN HDELTLEMVT DEERDYMRRV YANDSKARIN LGIRRRLAPL MTNDRRKIEL 

       370        380        390        400        410        420 
MNIMLLSLPG TPVLYYGDEI GMGDNYYLGD RDGVRTPMQW NADRNAGFSR ANPQKLLLPV 

       430        440        450        460        470        480 
IIDPEYHYEA INVEVQEGNT NSLLWWMRHT IATARKYKAL SRGTIEFLQV SNPKVLIFTR 

       490        500        510        520        530        540 
TFEDETVLTV INLSRNAQAV MIDLAAYADC IPEEVFSLNR FPKIRKTPYM VALGAYGYFW 

       550        560        570        580        590        600 
LKLVKESDES EGRPFLEEPY ASVTRWTNLF ASKNREKLEI DILPKYFMSS RWFGGKARTI 

       610        620        630        640        650        660 
IRVVIADTIP VEGMENAKML LAEVRYSSGE NELYQLPVCF VPDAMISRHD DNFYKRAIAR 

       670        680        690        700        710        720 
AVLGDEKGFL CDATYETAFL NQLFRLVMGQ HPWHGKSGQI SGCKGEKADV LCSEECHSSP 

       730        740        750        760        770        780 
EPALLGNEQS NTSIRYRDRL CLKLYRRIEI GVSPEIDMCR ALTEKTGFSN LPEYLGSLDY 

       790        800        810        820        830        840 
AQNRASHYSL GILQSYVQNE GNAWNISLDY AQRYYEDVLS KIQSVSELPA LPALGGNPVP 

       850        860        870        880        890        900 
LPSIMLELIG GPYLGLVEKL GERTAEMHIA LASINDDPQF APEPFTSLYQ RSIYQAMCEQ 

       910        920        930        940        950        960 
VKRSMMLLRL IKGNIPEEQQ ELVSRLLMSE EDILLQFDPI RREKIDAVKI RIHGDYHLGQ 

       970        980        990       1000       1010       1020 
VLYTGRDVVV IDFEGEPARP VSERKIKRSA FRDVAGMMRS FDYAAFNALL LNPVIRPEDR 

      1030       1040       1050       1060       1070       1080 
HRLEPWADLW SFYVSQHFID AYFNAVKGHD IIPEEPDQRE HLLRGYLMNK AIYELNYELN 

      1090 
NRPEWAMIPL RGILRMLE 

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References

[1]"Complete sequence of Chlorobium phaeobacteroides DSM 266."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Schmutz J., Larimer F., Land M., Hauser L., Mikhailova N., Li T., Overmann J., Bryant D.A., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 266 EMBL ABL66524.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000492 Genomic DNA. Translation: ABL66524.1.
RefSeqYP_912948.1. NC_008639.1.

3D structure databases

ProteinModelPortalA1BJE7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290317.Cpha266_2536.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABL66524; ABL66524; Cpha266_2536.
GeneID4569726.
KEGGcph:Cpha266_2536.
PATRIC21393759. VBIChlPha122104_3032.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMARDGTNNE.
OrthoDBEOG6RVFV2.
ProtClustDBCLSK2502817.

Enzyme and pathway databases

BioCycCPHA290317:GHX4-2584-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1BJE7_CHLPD
AccessionPrimary (citable) accession number: A1BJE7
Entry history
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: November 13, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)