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Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

Cpha266_2523

Organism
Chlorobium phaeobacteroides (strain DSM 266)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciCPHA290317:GHX4-2566-MONOMER.

Protein family/group databases

REBASEi14106. CphORF2524P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
Gene namesi
Ordered Locus Names:Cpha266_2523Imported
OrganismiChlorobium phaeobacteroides (strain DSM 266)Imported
Taxonomic identifieri290317 [NCBI]
Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium
ProteomesiUP000008701 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi290317.Cpha266_2523.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG275798.
HOGENOMiHOG000154777.
KOiK01155.
OMAiWISKFME.
OrthoDBiEOG661H6H.

Sequencei

Sequence statusi: Complete.

A1BJD4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEIDRNRIE LLVASIRELT PGQFSWLERT VQIFQCEHHY SILHSDLLDE
60 70 80 90 100
ETLENFGDAL RIHHSFSVEP FSKDKFEYVL ERVVNMSSER AKLAPKGNRG
110 120 130 140 150
HDITIDNTRV SLKTQADKGI REDKIWISKF MELGKGHWGD KPADLVSLLN
160 170 180 190 200
LFLTHLDNYE RIFILRALRK APDWIYELVE IPMQLLLLAG SGKLDMKSES
210 220 230 240 250
KQFPKPGYCF VNEGDTELYR LYFDGGSERK LQLKNLLKSR CIVHARWEFT

IPAV
Length:254
Mass (Da):29,552
Last modified:January 23, 2007 - v1
Checksum:i3851B3E1D3468CC6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000492 Genomic DNA. Translation: ABL66511.1.
RefSeqiWP_011746288.1. NC_008639.1.

Genome annotation databases

EnsemblBacteriaiABL66511; ABL66511; Cpha266_2523.
KEGGicph:Cpha266_2523.
PATRICi21393709. VBIChlPha122104_3012.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000492 Genomic DNA. Translation: ABL66511.1.
RefSeqiWP_011746288.1. NC_008639.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290317.Cpha266_2523.

Protein family/group databases

REBASEi14106. CphORF2524P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABL66511; ABL66511; Cpha266_2523.
KEGGicph:Cpha266_2523.
PATRICi21393709. VBIChlPha122104_3012.

Phylogenomic databases

eggNOGiNOG275798.
HOGENOMiHOG000154777.
KOiK01155.
OMAiWISKFME.
OrthoDBiEOG661H6H.

Enzyme and pathway databases

BioCyciCPHA290317:GHX4-2566-MONOMER.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Chlorobium phaeobacteroides DSM 266."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Schmutz J., Larimer F., Land M., Hauser L., Mikhailova N., Li T., Overmann J., Bryant D.A., Richardson P.
    Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 266Imported.

Entry informationi

Entry nameiA1BJD4_CHLPD
AccessioniPrimary (citable) accession number: A1BJD4
Entry historyi
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: July 22, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.