A1BJ68 (GCP_CHLPD) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp

Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein

Gene names

Name:	gcp
Ordered Locus Names:	Cpha266_2457

Organism

Chlorobium phaeobacteroides (strain DSM 266) [Complete proteome] [HAMAP]

Taxonomic identifier

290317 [NCBI]

Taxonomic lineage

Bacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium

Protein attributes

Sequence length	353 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine By similarity. HAMAP MF_01445
Subcellular location	Cytoplasm Potential HAMAP MF_01445.
Sequence similarities	Belongs to the KAE1 / YgjD family.

Ontologies

Keywords
Biological process	tRNA processing
Cellular component	Cytoplasm
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: InterPro tRNA processing Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 353	353	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp HAMAP MF_01445		PRO_0000303323

Sequences

	Sequence		Length	Mass (Da)
	A1BJ68 [UniParc]. Last modified January 23, 2007. Version 1. Checksum: 85B9134B41CA7BF5	FASTA	353	37,338
	10 20 30 40 50 60 MKILGIETSC DETSAAVLSN GSVCSNIVSS QLCHTSFGGV VPELASREHE RLIVSIVDSA 70 80 90 100 110 120 LSEANITKND LDVIAATAGP GLIGAVMVGL CFGQAMAYAL AIPFVPVNHI EAHIFSAFIQ 130 140 150 160 170 180 ETPHHQAPEG DFISLTVSGG HTLLSHVHKD FTYEVIGRTL DDAAGEAFDK TGKMLGLPYP 190 200 210 220 230 240 AGPVIDRLAK NGDPFFHEFP RALTAHSQTS KNYRGNSDFS FSGLKTSVLT FLKKQSPEFI 250 260 270 280 290 300 EKHLPDIAAS VQKAIVSVLV EKTVSAALAG NVKAISIAGG VSANSALRTS MKKACEQHGI 310 320 330 340 350 AFHVPNAEYS TDNAAMIATL AGLLLAHDLV PRNRYNIAPF ASFAAGRRKA SLT

References

[1]

"Complete sequence of Chlorobium phaeobacteroides DSM 266." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Schmutz J., Larimer F., Land M., Hauser L., Mikhailova N., Li T., Overmann J., Bryant D.A., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 266.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000492 Genomic DNA. Translation: ABL66445.1.
RefSeq	YP_912869.1. NC_008639.1.
3D structure databases
ProteinModelPortal	A1BJ68.
ModBase	Search...
Protein-protein interaction databases
STRING	A1BJ68.
Protein family/group databases
MEROPS	M22.001.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4568885.
GenomeReviews	Gene locus Cpha266_2457 in contig CP000492_GR.
KEGG	cph:Cpha266_2457.
NMPDR	fig|290317.7.peg.2572.
PATRIC	21393557. VBIChlPha122104_2937.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0533.
HOGENOM	HBG304663.
OMA	PAVGVHH.
ProtClustDB	PRK09604.
Family and domain databases
HAMAP	MF_01445. gcp. [Tree]
InterPro	IPR022450. Pept_M22_O-sialoglycopept. IPR000905. Peptidase_M22. IPR017861. Peptidase_M22_subgr. [Graphical view]
KO	K01409.
Pfam	PF00814. Peptidase_M22. 1 hit. [Graphical view]
PRINTS	PR00789. OSIALOPTASE.
TIGRFAMs	TIGR03723. Bact_gcp. 1 hit. TIGR00329. Gcp_kae1. 1 hit.
PROSITE	PS01016. GLYCOPROTEASE. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

GCP_CHLPD

Accession

Primary (citable) accession number: A1BJ68

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 11, 2007
Last sequence update:	January 23, 2007
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program