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A1BIP9 (A1BIP9_CHLPD) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length376 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS001608

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site421Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2701Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1431Substrate By similarity HAMAP-Rule MF_01201
Binding site3181Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue421N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
A1BIP9 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: E6941383C76C1B48

FASTA37641,326
        10         20         30         40         50         60 
MTIETPSLNM AEASISLGHL KHNIREIKQC VGTGVRIMGI VKANAYGHNM QKVAETLEAE 

        70         80         90        100        110        120 
GISDFGVANI HEAIELKTGG ALKKPANILS FSSPIIQQIE YYLHHQIDMT LCDANIMKAA 

       130        140        150        160        170        180 
SAIAEKHNKK IGVHLKVDTG MGRLGLPPLQ ALELLRETER QPGLELKGVY THFAESANDD 

       190        200        210        220        230        240 
FTRRQFKEFK TMTDAYETAS GKTLCKHAAS SGTLLNNPEM RLDMVRPGIL LYGYKPYPAL 

       250        260        270        280        290        300 
PSSITVRPVM QFEAKVIFIK TVAKDATISY NRTWKAARPV KIATISAGYA DGYHRALSNH 

       310        320        330        340        350        360 
ATVFINGKSF QQVGTVTMDQ FMVDLGTESD VKIGDRAILF GWEGPCLEEL AGSIGSISYE 

       370 
LLCSVSSRVK RVFTDD 

« Hide

References

[1]"Complete sequence of Chlorobium phaeobacteroides DSM 266."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Schmutz J., Larimer F., Land M., Hauser L., Mikhailova N., Li T., Overmann J., Bryant D.A., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 266 EMBL ABL66276.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000492 Genomic DNA. Translation: ABL66276.1.
RefSeqYP_912700.1. NC_008639.1.

3D structure databases

ProteinModelPortalA1BIP9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290317.Cpha266_2284.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABL66276; ABL66276; Cpha266_2284.
GeneID4568700.
KEGGcph:Cpha266_2284.
PATRIC21393141. VBIChlPha122104_2730.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAAEININN.
OrthoDBEOG6PP9NJ.

Enzyme and pathway databases

BioCycCPHA290317:GHX4-2325-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1BIP9_CHLPD
AccessionPrimary (citable) accession number: A1BIP9
Entry history
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: July 9, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)