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A1BHP7 (A1BHP7_CHLPD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.1.21.4 EMBL ABL65924.1
Gene names
Ordered Locus Names:Cpha266_1908 EMBL ABL65924.1
OrganismChlorobium phaeobacteroides (strain DSM 266) [Complete proteome] [HAMAP] EMBL ABL65924.1
Taxonomic identifier290317 [NCBI]
Taxonomic lineageBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium

Protein attributes

Sequence length245 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABL65924.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA restriction-modification system

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

Type II site-specific deoxyribonuclease activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A1BHP7 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: 1AD508B5B35D17A8

FASTA24527,206
        10         20         30         40         50         60 
MTLDLVNYEQ KAHEAVKSFW SNREVAKQKQ LLTGKADHGE RAGVTAGKNM DGFLALVLDI 

        70         80         90        100        110        120 
IQANGLAHAE IHQNRSMLTL PGYFRPTKLW DLLVIYKGEL IAAIELKSQV GSFGNNFNNR 

       130        140        150        160        170        180 
TEEAIGTAYD LWTAYREEAF GKQPRPFVGW LMMVEDAPKS RCAVRDASPH FPVFGEFEGA 

       190        200        210        220        230        240 
SYLMRYDLLC QKLVKEQLYT TAALITSTRC AAETGEFSEM SSMTGFRPFV TALAGHVAAA 


AARLD 

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References

[1]"Complete sequence of Chlorobium phaeobacteroides DSM 266."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Schmutz J., Larimer F., Land M., Hauser L., Mikhailova N., Li T., Overmann J., Bryant D.A., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 266 EMBL ABL65924.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000492 Genomic DNA. Translation: ABL65924.1.
RefSeqYP_912348.1. NC_008639.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290317.Cpha266_1908.

Protein family/group databases

REBASE14104. CphORF1909P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABL65924; ABL65924; Cpha266_1908.
GeneID4570867.
KEGGcph:Cpha266_1908.
PATRIC21392208. VBIChlPha122104_2267.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG43681.
HOGENOMHOG000153383.
KOK01155.
OMAFGKQPRP.
OrthoDBEOG63C0S1.

Enzyme and pathway databases

BioCycCPHA290317:GHX4-1945-MONOMER.

Family and domain databases

InterProIPR007636. Restrct_endonuc_II_XhoI.
[Graphical view]
PfamPF04555. XhoI. 1 hit.
[Graphical view]
PIRSFPIRSF000994. Restrict_endonuc_II_XhoI. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1BHP7_CHLPD
AccessionPrimary (citable) accession number: A1BHP7
Entry history
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: May 14, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)