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A1BGJ7 (A1BGJ7_CHLPD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.1.21.4 EMBL ABL65524.1
Gene names
Ordered Locus Names:Cpha266_1502 EMBL ABL65524.1
OrganismChlorobium phaeobacteroides (strain DSM 266) [Complete proteome] [HAMAP] EMBL ABL65524.1
Taxonomic identifier290317 [NCBI]
Taxonomic lineageBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium

Protein attributes

Sequence length282 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABL65524.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA restriction-modification system

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

Type II site-specific deoxyribonuclease activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A1BGJ7 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: FD87AFDE6F9484E7

FASTA28231,391
        10         20         30         40         50         60 
MQTTRDVESA LHVTGNMTAV TPAVICDHPD ILPTLRMSTC PPLAVDRLIG LSGVSSNLVK 

        70         80         90        100        110        120 
SLELRKKLPS KMNSGLLDED LHRIAAIIVK MADPDIFVWL GRKTQPDNDE IHRAATIVAD 

       130        140        150        160        170        180 
RLCGAVANPI IRNAQEKRQL AAIKSWLEAR GYRQLQNGEA VRFDSMPPGT FTFRMNVPVD 

       190        200        210        220        230        240 
LEGGVKRVNI PVDAVVMPGK SKKGALPVFF EAKSTGDFTN TNKRRKEEAM KMSQLRSTYG 

       250        260        270        280 
RNVRFNLFLC GYFDSGYLGY EAAEGIDWVW EHRIDDMALF GI 

« Hide

References

[1]"Complete sequence of Chlorobium phaeobacteroides DSM 266."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Schmutz J., Larimer F., Land M., Hauser L., Mikhailova N., Li T., Overmann J., Bryant D.A., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 266 EMBL ABL65524.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000492 Genomic DNA. Translation: ABL65524.1.
RefSeqYP_911948.1. NC_008639.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290317.Cpha266_1502.

Protein family/group databases

REBASE14098. CphORF1501P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABL65524; ABL65524; Cpha266_1502.
GeneID4570291.
KEGGcph:Cpha266_1502.
PATRIC21391197. VBIChlPha122104_1769.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG123893.
HOGENOMHOG000152015.
KOK01155.
OMAWEHRIDD.
OrthoDBEOG693GXR.
ProtClustDBCLSK850931.

Enzyme and pathway databases

BioCycCPHA290317:GHX4-1531-MONOMER.

Family and domain databases

InterProIPR019072. Restrct_endonuc_II_XamI.
[Graphical view]
PfamPF09572. RE_XamI. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1BGJ7_CHLPD
AccessionPrimary (citable) accession number: A1BGJ7
Entry history
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: April 16, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)