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Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

Cpha266_1502

Organism
Chlorobium phaeobacteroides (strain DSM 266)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciCPHA290317:GHX4-1531-MONOMER.

Protein family/group databases

REBASEi14098. CphORF1501P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
Gene namesi
Ordered Locus Names:Cpha266_1502Imported
OrganismiChlorobium phaeobacteroides (strain DSM 266)Imported
Taxonomic identifieri290317 [NCBI]
Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium
ProteomesiUP000008701 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi290317.Cpha266_1502.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG123893.
HOGENOMiHOG000152015.
KOiK01155.
OMAiWEHRIDD.
OrthoDBiEOG693GXR.

Family and domain databases

InterProiIPR019072. Restrct_endonuc_II_XamI.
[Graphical view]
PfamiPF09572. RE_XamI. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1BGJ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQTTRDVESA LHVTGNMTAV TPAVICDHPD ILPTLRMSTC PPLAVDRLIG
60 70 80 90 100
LSGVSSNLVK SLELRKKLPS KMNSGLLDED LHRIAAIIVK MADPDIFVWL
110 120 130 140 150
GRKTQPDNDE IHRAATIVAD RLCGAVANPI IRNAQEKRQL AAIKSWLEAR
160 170 180 190 200
GYRQLQNGEA VRFDSMPPGT FTFRMNVPVD LEGGVKRVNI PVDAVVMPGK
210 220 230 240 250
SKKGALPVFF EAKSTGDFTN TNKRRKEEAM KMSQLRSTYG RNVRFNLFLC
260 270 280
GYFDSGYLGY EAAEGIDWVW EHRIDDMALF GI
Length:282
Mass (Da):31,391
Last modified:January 23, 2007 - v1
Checksum:iFD87AFDE6F9484E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000492 Genomic DNA. Translation: ABL65524.1.

Genome annotation databases

EnsemblBacteriaiABL65524; ABL65524; Cpha266_1502.
KEGGicph:Cpha266_1502.
PATRICi21391197. VBIChlPha122104_1769.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000492 Genomic DNA. Translation: ABL65524.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290317.Cpha266_1502.

Protein family/group databases

REBASEi14098. CphORF1501P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABL65524; ABL65524; Cpha266_1502.
KEGGicph:Cpha266_1502.
PATRICi21391197. VBIChlPha122104_1769.

Phylogenomic databases

eggNOGiNOG123893.
HOGENOMiHOG000152015.
KOiK01155.
OMAiWEHRIDD.
OrthoDBiEOG693GXR.

Enzyme and pathway databases

BioCyciCPHA290317:GHX4-1531-MONOMER.

Family and domain databases

InterProiIPR019072. Restrct_endonuc_II_XamI.
[Graphical view]
PfamiPF09572. RE_XamI. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Chlorobium phaeobacteroides DSM 266."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Schmutz J., Larimer F., Land M., Hauser L., Mikhailova N., Li T., Overmann J., Bryant D.A., Richardson P.
    Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 266Imported.

Entry informationi

Entry nameiA1BGJ7_CHLPD
AccessioniPrimary (citable) accession number: A1BGJ7
Entry historyi
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: July 22, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.