A1BD18 (A1BD18_CHLPD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Transcription antitermination protein nusG RuleBase RU000538

Gene names

Ordered Locus Names:

Cpha266_0228

Organism

Chlorobium phaeobacteroides (strain DSM 266) [Complete proteome] [HAMAP]

Taxonomic identifier

290317 [NCBI]

Taxonomic lineage

Bacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium

Protein attributes

Sequence length	191 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. SAAS SAAS006645 RuleBase RU000538
Sequence similarities	Belongs to the nusG family. RuleBase RU003559

Ontologies

Keywords
Biological process	Transcription Transcription antitermination SAAS SAAS006645 RuleBase RU000538 Transcription regulation Transcription termination SAAS SAAS006645 RuleBase RU000538
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	positive regulation of transcription elongation from RNA polymerase II promoter Inferred from electronic annotation. Source: InterPro transcription antitermination Inferred from electronic annotation. Source: UniProtKB-KW transcription termination, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1BD18 [UniParc]. Last modified January 23, 2007. Version 1. Checksum: 41E71706940EEE5F	FASTA	191	21,479
	10 20 30 40 50 60 MNTRKKAVEE QGVPGPRWYA LRIYSGHERK VKEGIEAEVA RCGLADKILQ IYVPYERFVE 70 80 90 100 110 120 VKNGKKRSLT KNAFPGYVLI EAVLDKQTRN VILDMPSVMG FLGVDDVPTP LRPEEVEKIL 130 140 150 160 170 180 VTENTVEHRA VIEAPFRIGD SVKVIDGPFS SLTGVVHEVC TERMKVKVMI SFFGRSTPTE 190 LDFSQVKSVS Q

References

[1]

"Complete sequence of Chlorobium phaeobacteroides DSM 266." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Schmutz J., Larimer F., Land M., Hauser L., Mikhailova N., Li T., Overmann J., Bryant D.A., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 266.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000492 Genomic DNA. Translation: ABL64295.1.
RefSeq	YP_910719.1. NC_008639.1.
3D structure databases
ProteinModelPortal	A1BD18.
ModBase	Search...
Protein-protein interaction databases
STRING	A1BD18.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4570795.
GenomeReviews	Gene locus Cpha266_0228 in contig CP000492_GR.
KEGG	cph:Cpha266_0228.
NMPDR	fig|290317.7.peg.240.
PATRIC	21388152. VBIChlPha122104_0267.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0250.
HOGENOM	HBG751162.
OMA	VASGCEK.
ProtClustDB	CLSK637191.
Family and domain databases
InterPro	IPR005824. KOW. IPR001062. Transcrpt_antiterm_NusG. IPR006645. Transcrpt_antiterm_NusG_N. IPR014722. Transl_SH3-like_sub. IPR008991. Translation_prot_SH3-like. [Graphical view]
Gene3D	G3DSA:2.30.30.30. Ribosomal_L2. 1 hit. G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
KO	K02601.
Pfam	PF02357. NusG. 1 hit. [Graphical view]
PRINTS	PR00338. NUSGTNSCPFCT.
SMART	SM00739. KOW. 1 hit. SM00738. NGN. 1 hit. [Graphical view]
SUPFAM	SSF82679. Transcrpt_antiterm_NusG_N. 1 hit. SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR00922. NusG. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1BD18_CHLPD

Accession

Primary (citable) accession number: A1BD18

Entry history

Integrated into UniProtKB/TrEMBL:	January 23, 2007
Last sequence update:	January 23, 2007
Last modified:	December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)