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A1BAE6 (GLGA_PARDP) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Pden_4426
OrganismParacoccus denitrificans (strain Pd 1222) [Complete proteome] [HAMAP]
Taxonomic identifier318586 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeParacoccus

Protein attributes

Sequence length467 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 467467Glycogen synthase HAMAP-Rule MF_00484
PRO_1000014371

Sites

Binding site161ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
A1BAE6 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: 51A08DB13360B472

FASTA46749,189
        10         20         30         40         50         60 
MTRVLSVASE CVPLVKTGGL ADVAGALPAA LAGQGVGMRV LLPGYPAVLG AAAKTPVLRE 

        70         80         90        100        110        120 
IPDLFGGPAR IRRGALGKAV LYILDAPHLF DRPGGIYLGP DGRDWPDNPQ RFAALCKAAA 

       130        140        150        160        170        180 
LIAAEGVEDW RPQVLHLHDW QAGLTPIYLR QAGVRDVRTL LTIHNIAFQG LAPAHMLSAL 

       190        200        210        220        230        240 
QLPAHLFNPS GFEYWGRISA LKAGIVFADK VSTVSPTYAE ELMTPEFGMG MEGVLADRAG 

       250        260        270        280        290        300 
DFTGILNGID LDAWKPPYAT PQGKAPHRAA LRKEFGLPET DGPLCVVVSR LTGQKGLDLL 

       310        320        330        340        350        360 
IEALPALLEN GGQLAVLGSG DPGLEAAFAK AAARHAGVAL RLGYDEALSR RMIAGGDAIL 

       370        380        390        400        410        420 
VPSRFEPCGL TQLYGLRFGT LPLVALTGGL ADTVINASVA GLAAGVATGV QFHPVDARTL 

       430        440        450        460 
SRALTRLCAL WHQPAAWQRM MDNAMAHPVG WDASARAYAE LFEAMAA 

« Hide

References

[1]"Complete sequence of chromosome 2 of Paracoccus denitrificans PD1222."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J., van Spanning R.J.M., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Pd 1222.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000490 Genomic DNA. Translation: ABL72490.1.
RefSeqYP_918186.1. NC_008687.1.

3D structure databases

ProteinModelPortalA1BAE6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING318586.Pden_4426.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABL72490; ABL72490; Pden_4426.
GeneID4582976.
KEGGpde:Pden_4426.
PATRIC22860068. VBIParDen97112_4387.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAVEYYGGV.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycPDEN318586:GCVQ-4469-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_PARDP
AccessionPrimary (citable) accession number: A1BAE6
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 23, 2007
Last modified: May 14, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways