A1BA21 (A1BA21_PARDP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Aconitase EMBL ABL72365.1
EC=4.2.1.3 EMBL ABL72365.1

Gene names

Ordered Locus Names:

Pden_4301

Organism

Paracoccus denitrificans (strain Pd 1222) [Complete proteome] [HAMAP] EMBL ABL72365.1

Taxonomic identifier

318586 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Paracoccus

Protein attributes

Sequence length	919 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ABL72365.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: InterPro aconitate hydratase activity Inferred from electronic annotation. Source: EC citrate hydro-lyase (cis-aconitate-forming) activity Inferred from electronic annotation. Source: EC isocitrate hydro-lyase (cis-aconitate-forming) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1BA21 [UniParc]. Last modified January 23, 2007. Version 1. Checksum: A96A03611978D247	FASTA	919	99,802
	10 20 30 40 50 60 MPIETGTDTA KTRRQLQVGS QSYAYYSIDA ATQAGLGDFS KLPASLKVVL ENLLRFEDGG 70 80 90 100 110 120 RTVSVDDIKA FAEWARQGGQ NPREIAYRPA RVLMQDFTGV PAVVDLAAMR DGIKALGGDA 130 140 150 160 170 180 QKINPLNPVD LVIDHSVMID DFGNPRAFQR NVELEYERNM ERYTFLKWGQ NAFNNFRVVP 190 200 210 220 230 240 PGTGICHQVN LEYLAQTVWT DTDQKDETVA YPDTLVGTDS HTTMVNGLAV LGWGVGGIEA 250 260 270 280 290 300 EAAMLGQPVS MLIPEVVGFK LTGRMMEGTT ATDLVLKVVA MLRKKGVVGK FVEFYGDGLD 310 320 330 340 350 360 HLPLADRATI ANMAPEYGAT CGFFPIDNET LRYLRNTGRD EDRIALVEAY AKQNGFWRGA 370 380 390 400 410 420 DYAPVYTDTL HLDMSDIVPA ISGPKRPQDY TPLNLAARAF YKTVAEYRGV DMSAAAEEMV 430 440 450 460 470 480 EEGGGVVATS GTDVRKTVAV EGKDYAIRDG SVVIAAITSC TNTSNPYVMI GAGLVARKAR 490 500 510 520 530 540 ALGLTRKPWV KTSLAPGSQV VGEYLEAAGL QEDLDAIGFN LVGYGCTTCI GNSGPLGDAA 550 560 570 580 590 600 ISKAINDNDL VATAVLSGNR NFEGRISPDV RANYLASPPL VVAYAIAGDV NINLTRDPIG 610 620 630 640 650 660 QTPEGKDVYL KDIWPTSQEV AELVEATVTR EAFQKKYADV FKGDERWQAV EVTDSETYDW 670 680 690 700 710 720 PPTSTYIQNP PYFRGMSKEP GRIDNIDGAR ILAILGDMIT TDHISPAGSF KPTTPAGKYL 730 740 750 760 770 780 TERQVAPKDF NSYGSRRGNH EVMMRGTFAN IRIKNEMLDG VEGGYTLGPD GQQTSIFDAS 790 800 810 820 830 840 MAYQAQGTPL VIFGGVEYGA GSSRDWAAKG TNLLGVKAVI AESFERIHRS NLVGMGVIPF 850 860 870 880 890 900 EFTGGENRKT LNLKGDEVIS IDGLAGEFKP LSLVPCTIRY ADGSEKVIQL KARVDTEVEI 910 EYLENGGVLH YVLRNLARA

References

[1]

"Complete sequence of chromosome 2 of Paracoccus denitrificans PD1222." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J., van Spanning R.J.M., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000490 Genomic DNA. Translation: ABL72365.1.
RefSeq	YP_918061.1. NC_008687.1.
3D structure databases
ProteinModelPortal	A1BA21.
ModBase	Search...
Protein-protein interaction databases
STRING	A1BA21.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4582851.
GenomeReviews	Gene locus Pden_4301 in contig CP000490_GR.
KEGG	pde:Pden_4301.
PATRIC	22859802. VBIParDen97112_4254.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1048.
HOGENOM	HBG289738.
OMA	YSKAQGM.
PhylomeDB	A1BA21.
ProtClustDB	PRK09277.
Family and domain databases
InterPro	IPR015931. Acnase/IPM_dHydase_lsu_aba_1/3. IPR015937. Acoase/IPM_deHydtase. IPR001030. Acoase/IPM_deHydtase_lsu_aba. IPR015928. Aconitase/3IPM_dehydase_swvl. IPR006249. Aconitase/Fe_reg_prot_2. IPR015934. Aconitase/Fe_reg_prot_2/AcnD. IPR015932. Aconitase/IPMdHydase_lsu_aba_2. IPR018136. Aconitase_4Fe-4S_BS. IPR000573. AconitaseA/IPMdHydase_ssu_swvl. [Graphical view]
Gene3D	G3DSA:3.30.499.10. Acnase/IPM_dHydase_lsu_aba_1/3. 3 hits. G3DSA:3.20.19.10. Aconitase/3IPM_dehydase_swvl. 1 hit. G3DSA:3.40.1060.10. Aconitase/IPMdHydase_lsu_aba_2. 1 hit.
KO	K01681.
PANTHER	PTHR11670. Aconitase-like_core. 1 hit. PTHR11670:SF1. Aconitase/Fe_reg_prot_2/AcnD. 1 hit.
Pfam	PF00330. Aconitase. 1 hit. PF00694. Aconitase_C. 1 hit. [Graphical view]
PRINTS	PR00415. ACONITASE.
SUPFAM	SSF52016. Aconitase/3IPM_dehydase_swvl. 1 hit. SSF53732. Aconitase_N. 1 hit.
TIGRFAMs	TIGR01341. Aconitase_1. 1 hit.
PROSITE	PS00450. ACONITASE_1. 1 hit. PS01244. ACONITASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1BA21_PARDP

Accession

Primary (citable) accession number: A1BA21

Entry history

Integrated into UniProtKB/TrEMBL:	January 23, 2007
Last sequence update:	January 23, 2007
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)