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Protein
Submitted name:

Sulfur dehydrogenase subunit SoxD

Gene

Pden_4156

Organism
Paracoccus denitrificans (strain Pd 1222)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseImported
LigandHemePROSITE-ProRule annotation, Iron, Metal-binding

Enzyme and pathway databases

BioCyciPDEN318586:G1GW1-4816-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Sulfur dehydrogenase subunit SoxDImported (EC:1.-.-.-Imported)
Gene namesi
Ordered Locus Names:Pden_4156Imported
OrganismiParacoccus denitrificans (strain Pd 1222)Imported
Taxonomic identifieri318586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeParacoccus
Proteomesi
  • UP000000361 Componenti: Chromosome 2

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_500263244425 – 382Sequence analysisAdd BLAST358

Interactioni

Protein-protein interaction databases

STRINGi318586.Pden_4156

Structurei

3D structure databases

ProteinModelPortaliA1B9M6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini57 – 145Cytochrome cInterPro annotationAdd BLAST89
Domaini278 – 381Cytochrome cInterPro annotationAdd BLAST104

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4107E84 Bacteria
ENOG4111IDB LUCA
HOGENOMiHOG000268780
KOiK08738
OMAiGESNEVF
OrthoDBiPOG091H10TH

Family and domain databases

Gene3Di1.10.760.102 hits
InterProiView protein in InterPro
IPR009056 Cyt_c-like_dom
IPR036909 Cyt_c-like_dom_sf
IPR002327 Cyt_c_1A/1B
PANTHERiPTHR11961 PTHR11961, 2 hits
PfamiView protein in Pfam
PF00034 Cytochrom_C, 1 hit
PF13442 Cytochrome_CBB3, 1 hit
PRINTSiPR00604 CYTCHRMECIAB
SUPFAMiSSF46626 SSF46626, 2 hits
PROSITEiView protein in PROSITE
PS51007 CYTC, 2 hits

Sequencei

Sequence statusi: Complete.

A1B9M6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRSHKLFFA SLLAASALAG PAMADRLGLG REALPEEISA WDVAVLPDGQ
60 70 80 90 100
GLRPGSGDVM TGDELFADNC ASCHGDFAEG LDSWPVLAGG DGSLTDPRPV
110 120 130 140 150
KTIGSYWPHL STVYDYVHRS MPFGSAQTLS VDDTYAITAF LLYSNGLVED
160 170 180 190 200
DFVLTHENFT QVVLPNAEGF YPDDRPETEY PLFSKEPCMT DCAAAVEIAK
210 220 230 240 250
RAVDLNVTPE DADGRPAGTM PDIGAGAAPA EPAEPVEKKA EAAPAEAPAA
260 270 280 290 300
ARESVVKTAA VAPEAPAPAT ADTATDPALV AAGEKVFKKC TACHKLGEGA
310 320 330 340 350
KNGTGPLLNG IVGRPAGEIE GFKYSKPLLA MASDGLVWDD AALHAFLENP
360 370 380
KGFMKGTKMS FAGLKKEDER AAVIAYLATF DE
Length:382
Mass (Da):40,049
Last modified:January 23, 2007 - v1
Checksum:i46515A2A66AFDCF7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000490 Genomic DNA Translation: ABL72220.1
RefSeqiWP_011750385.1, NC_008687.1

Genome annotation databases

EnsemblBacteriaiABL72220; ABL72220; Pden_4156
KEGGipde:Pden_4156

Similar proteinsi

Entry informationi

Entry nameiA1B9M6_PARDP
AccessioniPrimary (citable) accession number: A1B9M6
Entry historyiIntegrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: February 28, 2018
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported