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Protein
Submitted name:

3-carboxy-cis,cis-muconate cycloisomerase

Gene

Pden_3496

Organism
Paracoccus denitrificans (strain Pd 1222)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Names & Taxonomyi

Protein namesi
Submitted name:
3-carboxy-cis,cis-muconate cycloisomeraseImported (EC:5.5.1.2Imported)
Gene namesi
Ordered Locus Names:Pden_3496Imported
OrganismiParacoccus denitrificans (strain Pd 1222)Imported
Taxonomic identifieri318586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeParacoccus
Proteomesi
  • UP000000361 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi318586.Pden_3496.

Structurei

3D structure databases

ProteinModelPortaliA1B7S2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 289Lyase_1InterPro annotationAdd BLAST276

Phylogenomic databases

eggNOGiENOG4107RAW. Bacteria.
COG0015. LUCA.
HOGENOMiHOG000033914.
KOiK01857.
OMAiHRATPMI.
OrthoDBiPOG091H0168.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1B7S2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVGTLFGQL YGDDEMAAIL SDRSAILAML RVEVALARAQ ADLGAIPAAA
60 70 80 90 100
AEVIAKAAEA LDPDPAELAA AVARAGITAQ PVIAALKSAA GEAGAFAHYG
110 120 130 140 150
ATSQDIVDTA LALQLVAALD LLGGRLDRLT ALLVQKAADH ADLPIPARTR
160 170 180 190 200
HQIAAPTTLG AKIAVWHGMA ARNRQRLDEL RPRLLLVSLH GAAGTEAALA
210 220 230 240 250
GHGPALRASM AAALGLGVPA GPWHAARDGI AELAGWLSLV TGALGKMGLD
260 270 280 290 300
LVQLGQSEIA EVAAGAGGGS STMPQKQNPV AAEALATLAR LNAGDLAGMH
310 320 330 340 350
QALVHAQERD GIALGLEWNL LPGMLERSAA ALRIACDLAG TLVPRPDRIA
360 370 380 390 400
ATFAADRGRM AAEAAGFLLA QTLPRAEALR IVAQALAQVA GGEAPTLADA
410 420 430
LARLAPGRDW AEALRPENLT GAAPDQARAA RPI
Length:433
Mass (Da):43,968
Last modified:January 23, 2007 - v1
Checksum:iB743F9451861BE7B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000490 Genomic DNA. Translation: ABL71566.1.
RefSeqiWP_011749742.1. NC_008687.1.

Genome annotation databases

EnsemblBacteriaiABL71566; ABL71566; Pden_3496.
KEGGipde:Pden_3496.
PATRICi22858124. VBIParDen97112_3421.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000490 Genomic DNA. Translation: ABL71566.1.
RefSeqiWP_011749742.1. NC_008687.1.

3D structure databases

ProteinModelPortaliA1B7S2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi318586.Pden_3496.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABL71566; ABL71566; Pden_3496.
KEGGipde:Pden_3496.
PATRICi22858124. VBIParDen97112_3421.

Phylogenomic databases

eggNOGiENOG4107RAW. Bacteria.
COG0015. LUCA.
HOGENOMiHOG000033914.
KOiK01857.
OMAiHRATPMI.
OrthoDBiPOG091H0168.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA1B7S2_PARDP
AccessioniPrimary (citable) accession number: A1B7S2
Entry historyi
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: November 2, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.