Skip Header

Contribute Send feedback
Read comments (?) or add your own

A1B5B1 (A1B5B1_PARDP) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Glycerol kinase 1 HAMAP MF_00186
EC=2.7.1.30 HAMAP MF_00186
Alternative name(s):
ATP:glycerol 3-phosphotransferase 1 HAMAP MF_00186
Glycerokinase 1 HAMAP MF_00186
Gene names
Name:glpK1 HAMAP MF_00186
Ordered Locus Names:Pden_2618
OrganismParacoccus denitrificans (strain Pd 1222) [Complete proteome] [HAMAP] EMBL ABL70705.1
Taxonomic identifier318586 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Paracoccus

Protein attributes

Sequence length495 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Key enzyme in the regulation of glycerol uptake and metabolism By similarity. HAMAP MF_00186 SAAS SAAS018483

Catalytic activity

ATP + glycerol = ADP + sn-glycerol 3-phosphate. HAMAP MF_00186 SAAS SAAS018483

Pathway

Polyol metabolism; glycerol degradation via glycerol kinase pathway; sn-glycerol 3-phosphate from glycerol: step 1/1. HAMAP MF_00186 SAAS SAAS018483

Sequence similarities

Belongs to the FGGY kinase family. HAMAP MF_00186 RuleBase RU003733

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding409 – 4135ATP By similarity HAMAP MF_00186

Sites

Binding site111Substrate By similarity HAMAP MF_00186
Binding site151ATP By similarity HAMAP MF_00186
Binding site811Substrate By similarity HAMAP MF_00186
Binding site1331Substrate By similarity HAMAP MF_00186
Binding site2421Substrate By similarity HAMAP MF_00186
Binding site2641ATP By similarity HAMAP MF_00186
Binding site3071ATP; via carbonyl oxygen By similarity HAMAP MF_00186

Sequences

Sequence LengthMass (Da)Tools
A1B5B1 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: F16A9CD9AC790A59

FASTA49553,480
        10         20         30         40         50         60 
MTHILAIDQG TTSSRAILFD AGLRVVSSAQ HEFPQHYPFS GWVEHDASDL WVTVAGVARA 

        70         80         90        100        110        120 
AVEKAGLHAG DIAAIGITNQ RETTLLWDRR TGQPLHRAIV WQDRRTAGLC DRLRAEGHEP 

       130        140        150        160        170        180 
MIAARTGLLL DPYFSGSKLK WLLDNIDGAR ARARRGELAF GTVDSWLIWN LTGGRVHATD 

       190        200        210        220        230        240 
ATNAARTLLY NIAENRWDAE ICALFDIPMP LLPEVRDCAA DFGMARADLF GREIPILGVA 

       250        260        270        280        290        300 
GDQQAATVGQ ACFQPGMMKS TYGTGCFALL NTGEEMVASK NRLLSTIAYR LEGRTTYALE 

       310        320        330        340        350        360 
GSIFIAGAVV QWLRDGLGLI RSAAETQGLA EAADPGQELV LVPAFTGLGA PYWRPDCRGA 

       370        380        390        400        410        420 
VFGLTRNSGP AELARAALES VGFQTRDLWE AMRADWPGAA AGVLRVDGGM AASGWTMQFL 

       430        440        450        460        470        480 
ADILGAPVDR PRVTETTALG AGYLAGLQAG LCPPPGDFAR DWALERRFEP AMAEGERETR 

       490 
YGRWKQAVKA TMGVA

« Hide

References

[1]"Complete sequence of chromosome 1 of Paracoccus denitrificans PD1222."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J., van Spanning R.J.M., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000489 Genomic DNA. Translation: ABL70705.1.
RefSeqYP_916401.1. NC_008686.1.

3D structure databases

ProteinModelPortalA1B5B1.
SMRA1B5B1. Positions 4-494.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1B5B1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4580717.
GenomeReviewsGene locus Pden_2618 in contig CP000489_GR.
KEGGpde:Pden_2618.
PATRIC22856369. VBIParDen97112_2549.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0554.
HOGENOMHBG511469.
OMACYQTRDL.
PhylomeDBA1B5B1.
ProtClustDBCLSK841015.

Family and domain databases

HAMAPMF_00186. Glycerol_kin.
[Tree]
InterProIPR000577. Carb_kinase_FGGY.
IPR018485. Carb_kinase_FGGY_C.
IPR018483. Carb_kinase_FGGY_CS.
IPR018484. Carb_kinase_FGGY_N.
IPR005999. Glycerol_kin.
[Graphical view]
KOK00864.
PANTHERPTHR10196. FGGY_kin. 1 hit.
PTHR10196:SF9. Glycerol_kin. 1 hit.
PfamPF02782. FGGY_C. 1 hit.
PF00370. FGGY_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR01311. Glycerol_kin. 1 hit.
PROSITEPS00933. FGGY_KINASES_1. 1 hit.
PS00445. FGGY_KINASES_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1B5B1_PARDP
AccessionPrimary (citable) accession number: A1B5B1
Entry history
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info