A1B433 (A1B433_PARDP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 25 EMBL ABL70277.1

Gene names

Ordered Locus Names:

Pden_2185

Organism

Paracoccus denitrificans (strain Pd 1222) [Complete proteome] [HAMAP] EMBL ABL70277.1

Taxonomic identifier

318586 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Paracoccus

Protein attributes

Sequence length	260 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABL70277.1
Molecular function	Hydrolase EMBL ABL70277.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 31	31	Potential EMBL ABL70277.1
	Chain	32 – 260	229	Potential EMBL ABL70277.1		PRO_5000182692

Sequences

	Sequence		Length	Mass (Da)
	A1B433 [UniParc]. Last modified January 23, 2007. Version 1. Checksum: CA43A4467D0BF2A1	FASTA	260	29,403
	10 20 30 40 50 60 MTFLGKIMAV LALVVLASCG GPSSGPAVMA GQGRGPQFGD SAPHPWVGGH PYDHPVHGID 70 80 90 100 110 120 ISRWQGDIDW NRVRSSGISF AFIKATEGGD HSDPNFRRYW REAAQARIPR GAYHYFYFCR 130 140 150 160 170 180 SGSEQAAWFI ANVPRERGAM PPVLDLEWTA SKTCPHRPPS HEVLREAKIF KDILHRHYGQ 190 200 210 220 230 240 RPIIYTTVDF YRDNNLGSWP EEFWLRSVAG HPRIVYPGQR YSFWQYTGTG IVPGIKGNVD 250 260 LNVFAGSPAQ WRVWLNQRLQ

References

[1]

"Complete sequence of chromosome 1 of Paracoccus denitrificans PD1222." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J., van Spanning R.J.M., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000489 Genomic DNA. Translation: ABL70277.1.
RefSeq	YP_915973.1. NC_008686.1.
3D structure databases
ProteinModelPortal	A1B433.
ModBase	Search...
Protein-protein interaction databases
STRING	A1B433.
Protein family/group databases
CAZy	GH25. Glycoside Hydrolase Family 25.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4579161.
GenomeReviews	Gene locus Pden_2185 in contig CP000489_GR.
KEGG	pde:Pden_2185.
PATRIC	22855495. VBIParDen97112_2116.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3757.
HOGENOM	HBG580490.
OMA	ERFRENW.
PhylomeDB	A1B433.
Family and domain databases
InterPro	IPR002053. Glyco_hydro_25. IPR018077. Glyco_hydro_fam25_subgr. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K07273.
Pfam	PF01183. Glyco_hydro_25. 1 hit. [Graphical view]
SMART	SM00641. Glyco_25. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1B433_PARDP

Accession

Primary (citable) accession number: A1B433

Entry history

Integrated into UniProtKB/TrEMBL:	January 23, 2007
Last sequence update:	January 23, 2007
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)