A1B2K7 (A1B2K7_PARDP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lysine--tRNA ligase EMBL ABL69751.1
EC=6.1.1.6 EMBL ABL69751.1

Gene names

Ordered Locus Names:

Pden_1654

Organism

Paracoccus denitrificans (strain Pd 1222) [Complete proteome] [HAMAP] EMBL ABL69751.1

Taxonomic identifier

318586 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Paracoccus

Protein attributes

Sequence length	348 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lysyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW lysine-tRNA ligase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1B2K7 [UniParc]. Last modified January 23, 2007. Version 1. Checksum: 681061D09A5605B0	FASTA	348	39,031
	10 20 30 40 50 60 MKSADESPWW DRDRHAGRRP LLLARNRIQA AIRDWLGTQG FIEADPLALA VSPGNEAHLH 70 80 90 100 110 120 AFATHRIGND GLAQPMYLHT SPEFAMKKLL AAGEERIFAF SHVWRNRERG ALHSPEFTML 130 140 150 160 170 180 EWYRAGEDYR VLFDDCAQYL RHAAEVAGAE LLRFRGAECD PYAAPEVMSV AEAFREHAGI 190 200 210 220 230 240 DLLSTCDGTE TDTRALRAQA ERQGIRTAPD DGWSDILSRA LVERVEPHLG HGRPLILDRY 250 260 270 280 290 300 PAAEAALARR AGDDPREAER FELYACGVEL ANGFGELTDP VEQRRRFELE MEEKARIYGE 310 320 330 340 CYPLDEDFLA ALAFMPAASG CALGFDRLVM LATGAPRIDE VIWTPLID

References

[1]

"Complete sequence of chromosome 1 of Paracoccus denitrificans PD1222." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J., van Spanning R.J.M., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000489 Genomic DNA. Translation: ABL69751.1.
RefSeq	YP_915447.1. NC_008686.1.
3D structure databases
ProteinModelPortal	A1B2K7.
ModBase	Search...
Protein-protein interaction databases
STRING	A1B2K7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4580836.
GenomeReviews	Gene locus Pden_1654 in contig CP000489_GR.
KEGG	pde:Pden_1654.
PATRIC	22854381. VBIParDen97112_1579.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2269.
HOGENOM	HBG631383.
OMA	MPEASGI.
PhylomeDB	A1B2K7.
ProtClustDB	CLSK2396840.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004525. Lys-tRNA-synth-rel. IPR018149. Lys-tRNA-synth_II_C. [Graphical view]
KO	K04568.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF7. PTHR22594:SF7. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. [Graphical view]
PRINTS	PR00982. TRNASYNTHLYS.
TIGRFAMs	TIGR00462. GenX. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1B2K7_PARDP

Accession

Primary (citable) accession number: A1B2K7

Entry history

Integrated into UniProtKB/TrEMBL:	January 23, 2007
Last sequence update:	January 23, 2007
Last modified:	December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)