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Protein

Aspartate ammonia-lyase

Gene

Pden_0939

Organism
Paracoccus denitrificans (strain Pd 1222)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-aspartate = fumarate + NH3.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
Aspartate ammonia-lyaseUniRule annotation (EC:4.3.1.1UniRule annotation)
Short name:
AspartaseUniRule annotation
Gene namesi
Ordered Locus Names:Pden_0939Imported
OrganismiParacoccus denitrificans (strain Pd 1222)Imported
Taxonomic identifieri318586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeParacoccus
Proteomesi
  • UP000000361 Componenti: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi318586.Pden_0939.

Structurei

3D structure databases

ProteinModelPortaliA1B0K6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini13 – 343Lyase_1InterPro annotationAdd BLAST331
Domaini409 – 462FumaraseC_CInterPro annotationAdd BLAST54

Sequence similaritiesi

Belongs to the class-II fumarase/aspartase family. Aspartase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108IJ0. Bacteria.
COG1027. LUCA.
HOGENOMiHOG000061737.
KOiK01744.
OMAiEICENYV.
OrthoDBiPOG091H01XG.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR004708. ApsA.
IPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00839. aspA. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1B0K6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKTRIEHDL LGDREVPADA YWGVHTLRAV ENFPISGRPI GEIPELIRAL
60 70 80 90 100
AAIKQAAALA NADLGLLSAE RRDAIVAACE EIRAGKLHEQ FVVDQIQGGA
110 120 130 140 150
GTSTNMNANE VIANRALELM GHAKGEYQYL HPNEHVNLSQ STNDVYPTAL
160 170 180 190 200
RLASWRGLQN VIAALASLRG AFAEKGGEFA EILKMGRTQL QEAVPMTLGQ
210 220 230 240 250
EFNAFAITIG EDEVRLAEAA SLICEINLGA TAIGTGITTH PEYAERVRAR
260 270 280 290 300
LAEITVIPVV TAPDLVEATQ DCGAFVQVSG VLKRVAVKLS KICNDLRLLS
310 320 330 340 350
SGPRAGLNEI NLPAKQAGSS IMPGKVNPVI PEVVNQVCFE VIGNDMTITM
360 370 380 390 400
AAEGGQLQLN AFEPVIAYSM FRSVSHLIAA CDTLEHNCVR GITANRDVLK
410 420 430 440 450
ETVRRSIGIV TALNPYIGYA AATEVATEAH LTGRGVYELV LEKGLLPKER
460
LDAILRPESL TRPQLFVN
Length:468
Mass (Da):50,416
Last modified:January 23, 2007 - v1
Checksum:i54EBED1E4D40E1A4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000489 Genomic DNA. Translation: ABL69050.1.
RefSeqiWP_011747278.1. NC_008686.1.

Genome annotation databases

EnsemblBacteriaiABL69050; ABL69050; Pden_0939.
KEGGipde:Pden_0939.
PATRICi22853042. VBIParDen97112_0917.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000489 Genomic DNA. Translation: ABL69050.1.
RefSeqiWP_011747278.1. NC_008686.1.

3D structure databases

ProteinModelPortaliA1B0K6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi318586.Pden_0939.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABL69050; ABL69050; Pden_0939.
KEGGipde:Pden_0939.
PATRICi22853042. VBIParDen97112_0917.

Phylogenomic databases

eggNOGiENOG4108IJ0. Bacteria.
COG1027. LUCA.
HOGENOMiHOG000061737.
KOiK01744.
OMAiEICENYV.
OrthoDBiPOG091H01XG.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR004708. ApsA.
IPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00839. aspA. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA1B0K6_PARDP
AccessioniPrimary (citable) accession number: A1B0K6
Entry historyi
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: November 2, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.