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Protein

Pseudouridine synthase

Gene

Pden_0790

Organism
Paracoccus denitrificans (strain Pd 1222)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil.UniRule annotation

Catalytic activityi

RNA uridine = RNA pseudouridine.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotationImported, RNA-bindingPROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciPDEN318586:G1GW1-796-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Ordered Locus Names:Pden_0790Imported
OrganismiParacoccus denitrificans (strain Pd 1222)Imported
Taxonomic identifieri318586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeParacoccus
Proteomesi
  • UP000000361 Componenti: Chromosome 1

PTM / Processingi

Proteomic databases

PRIDEiA1B058

Interactioni

Protein-protein interaction databases

STRINGi318586.Pden_0790

Structurei

3D structure databases

ProteinModelPortaliA1B058
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini16 – 85S4 RNA-bindingInterPro annotationAdd BLAST70

Sequence similaritiesi

Belongs to the pseudouridine synthase RluA family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105EI2 Bacteria
COG0564 LUCA
HOGENOMiHOG000275914
KOiK06179
OMAiWNLLGLD
OrthoDBiPOG091H064O

Family and domain databases

CDDicd02869 PseudoU_synth_RluCD_like, 1 hit
cd00165 S4, 1 hit
Gene3Di3.10.290.10, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR006225 PsdUridine_synth_RluC/D
IPR006224 PsdUridine_synth_RluC/D_CS
IPR006145 PsdUridine_synth_RsuA/RluD
IPR002942 S4_RNA-bd
IPR036986 S4_RNA-bd_sf
PfamiView protein in Pfam
PF00849 PseudoU_synth_2, 1 hit
PF01479 S4, 1 hit
SMARTiView protein in SMART
SM00363 S4, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
TIGRFAMsiTIGR00005 rluA_subfam, 1 hit
PROSITEiView protein in PROSITE
PS01129 PSI_RLU, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

A1B058-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGVQTIRVG EDEGEQRIDR WLKKRFPQLT QGAVEKMCRT GQLRVDGGRV
60 70 80 90 100
KANTRIEPGQ EVRVPPLPEG APPPAAPKAS VKQSDAEMIQ SCVLWRDEHI
110 120 130 140 150
IALNKPPGLP SQGGSGQGDR HVDGLTTALM FGYKDRPKLV HRLDKDTSGV
160 170 180 190 200
LLLARTDRIA RALSEAFRHR LTRKIYWAAV AGVPHPRMGS IKYGLVKAPG
210 220 230 240 250
RGRGGEGEKM MAVHPSAVAA TEGAKRAHTD YAVLDALGGR VSWVAMVPVT
260 270 280 290 300
GRTHQLRAHM AEIGHPIVGD GKYGGSGQEN LGDGWGAQLG GEISRKLHLH
310 320 330 340
ARMIRFEHPI TKKLITVTAP LPEHMSRTWK TLGWSENDVP EDPFAETA
Length:348
Mass (Da):37,956
Last modified:January 23, 2007 - v1
Checksum:iC983BEBDC9AF8C34
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000489 Genomic DNA Translation: ABL68902.1
RefSeqiWP_011747130.1, NC_008686.1

Genome annotation databases

EnsemblBacteriaiABL68902; ABL68902; Pden_0790
KEGGipde:Pden_0790

Similar proteinsi

Entry informationi

Entry nameiA1B058_PARDP
AccessioniPrimary (citable) accession number: A1B058
Entry historyiIntegrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: May 23, 2018
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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