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A1AZ32

- A1AZ32_PARDP

UniProt

A1AZ32 - A1AZ32_PARDP

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Pden_0412

Organism
Paracoccus denitrificans (strain Pd 1222)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPDEN318586:GCVQ-420-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Pden_0412Imported
OrganismiParacoccus denitrificans (strain Pd 1222)Imported
Taxonomic identifieri318586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeParacoccus
ProteomesiUP000000361: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi318586.Pden_0412.

Structurei

3D structure databases

ProteinModelPortaliA1AZ32.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiKSASTHN.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1AZ32-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKAFAALLER LAFTPARNAK LQLLQHYLER TPDPDRGWAL AALTGDLELR
60 70 80 90 100
RVTPSLLRGL AAERVDGELL ALSYDFVGDL AETIALLWPE GAEDDPSLSQ
110 120 130 140 150
AVALLQGTGK AALPGAIAGM LDRLGPSERL AFLKLATGNL RIGVSARMAR
160 170 180 190 200
TALAGMGVPS VPEIEEIWHG LAPPYAPLFG WLGGGARPES AALAPFRPVM
210 220 230 240 250
LSTPTDLDEL RALDPGDYLA EWKWDGIRVQ AVSEGGMRRL YSRTGEDISH
260 270 280 290 300
AFPDVIEAMD FDGTADGELI VRREGEVAPF GDLQKRLNRK TVGKGLLASH
310 320 330 340 350
PAGLRLYDLL LWDGRDLRAE PLGARRTVLE AVDFGPRIDI SPLLDFATWE
360 370 380 390 400
DLAALRAEPP AAVIEGVMIK RRDSAYVAGR PRGPWFKWKR DPMVVDAVLI
410 420 430 440 450
YAQRGHGKRS GFHSDFTFGL WDGGELVPVG KAYFGFTDAE LRELDRFVRQ
460 470 480 490 500
NTVERYGPVR ALAPKLVVEV AFEGLNRSTR HRSGVAMRFP RISRIRWDKP
510
AAEADRLETL EAML
Length:514
Mass (Da):56,550
Last modified:January 23, 2007 - v1
Checksum:iAF98C5DA5ADFC8EA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000489 Genomic DNA. Translation: ABL68526.1.
RefSeqiWP_011746759.1. NC_008686.1.
YP_914222.1. NC_008686.1.

Genome annotation databases

EnsemblBacteriaiABL68526; ABL68526; Pden_0412.
GeneIDi4578699.
KEGGipde:Pden_0412.
PATRICi22851980. VBIParDen97112_0393.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000489 Genomic DNA. Translation: ABL68526.1 .
RefSeqi WP_011746759.1. NC_008686.1.
YP_914222.1. NC_008686.1.

3D structure databases

ProteinModelPortali A1AZ32.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 318586.Pden_0412.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABL68526 ; ABL68526 ; Pden_0412 .
GeneIDi 4578699.
KEGGi pde:Pden_0412.
PATRICi 22851980. VBIParDen97112_0393.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi KSASTHN.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci PDEN318586:GCVQ-420-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Pd 1222Imported.

Entry informationi

Entry nameiA1AZ32_PARDP
AccessioniPrimary (citable) accession number: A1AZ32
Entry historyi
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: October 1, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3