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A1AZ32 (A1AZ32_PARDP) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Pden_0412 EMBL ABL68526.1
OrganismParacoccus denitrificans (strain Pd 1222) [Complete proteome] [HAMAP] EMBL ABL68526.1
Taxonomic identifier318586 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeParacoccus

Protein attributes

Sequence length514 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A1AZ32 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: AF98C5DA5ADFC8EA

FASTA51456,550
        10         20         30         40         50         60 
MKAFAALLER LAFTPARNAK LQLLQHYLER TPDPDRGWAL AALTGDLELR RVTPSLLRGL 

        70         80         90        100        110        120 
AAERVDGELL ALSYDFVGDL AETIALLWPE GAEDDPSLSQ AVALLQGTGK AALPGAIAGM 

       130        140        150        160        170        180 
LDRLGPSERL AFLKLATGNL RIGVSARMAR TALAGMGVPS VPEIEEIWHG LAPPYAPLFG 

       190        200        210        220        230        240 
WLGGGARPES AALAPFRPVM LSTPTDLDEL RALDPGDYLA EWKWDGIRVQ AVSEGGMRRL 

       250        260        270        280        290        300 
YSRTGEDISH AFPDVIEAMD FDGTADGELI VRREGEVAPF GDLQKRLNRK TVGKGLLASH 

       310        320        330        340        350        360 
PAGLRLYDLL LWDGRDLRAE PLGARRTVLE AVDFGPRIDI SPLLDFATWE DLAALRAEPP 

       370        380        390        400        410        420 
AAVIEGVMIK RRDSAYVAGR PRGPWFKWKR DPMVVDAVLI YAQRGHGKRS GFHSDFTFGL 

       430        440        450        460        470        480 
WDGGELVPVG KAYFGFTDAE LRELDRFVRQ NTVERYGPVR ALAPKLVVEV AFEGLNRSTR 

       490        500        510 
HRSGVAMRFP RISRIRWDKP AAEADRLETL EAML 

« Hide

References

[1]"Complete sequence of chromosome 1 of Paracoccus denitrificans PD1222."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J., van Spanning R.J.M., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Pd 1222.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000489 Genomic DNA. Translation: ABL68526.1.
RefSeqYP_914222.1. NC_008686.1.

3D structure databases

ProteinModelPortalA1AZ32.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING318586.Pden_0412.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABL68526; ABL68526; Pden_0412.
GeneID4578699.
KEGGpde:Pden_0412.
PATRIC22851980. VBIParDen97112_0393.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAKSASTHN.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycPDEN318586:GCVQ-420-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1AZ32_PARDP
AccessionPrimary (citable) accession number: A1AZ32
Entry history
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: May 14, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)