A1AW07 (A1AW07_RUTMC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Tryptophanyl-tRNA synthetase EMBL ABL02114.1
EC=6.1.1.2 EMBL ABL02114.1

Gene names

Ordered Locus Names:

Rmag_0338 EMBL ABL02114.1

Organism

Ruthia magnifica subsp. Calyptogena magnifica [Complete proteome] [HAMAP] EMBL ABL02114.1

Taxonomic identifier

413404 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › unclassified Gammaproteobacteria › sulfur-oxidizing symbionts › Candidatus Ruthia magnifica

Protein attributes

Sequence length	399 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. RuleBase RU003489

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003489
Ligand	ATP-binding RuleBase RU003489 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003489 EMBL ABL02114.1 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tryptophanyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW tryptophan-tRNA ligase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1AW07 [UniParc]. Last modified January 23, 2007. Version 1. Checksum: E507EBE18CDD991B	FASTA	399	45,338
	10 20 30 40 50 60 MQDKRVLSGM RPTGQLHLGH YYGVLKNWLA LQNEYDSYFF VADWHTFTTH YSDKIDLNTN 70 80 90 100 110 120 VMKMVVDWLS VGINPNTSTI FVQSKVPEHA ELHLLLSMLT PLSWLERVPS YKDQQLKLST 130 140 150 160 170 180 KDLATYGFLG YPLLQSADIL IYKAGLVPVG EDQVAHIELT REVARRFNYL YGREVDFEEK 190 200 210 220 230 240 AEIAISKMGK KQAKLYRSLR KVYQEIGNDD ALIKAQALLQ QQQNITLGDR ERLLGYIEGV 250 260 270 280 290 300 GKIVLPEPES LLTKASKMPG LDGQKMSKSY GNTISLRDTA EQIRAKIKHM PTDPARIKLT 310 320 330 340 350 360 DIGNPQKCLV WQLHKVYSNK STCDWVVEGC TKAKIGCVEC KQPIINAIEE ELTPIQERIA 370 380 390 KYQADPGLIK QIIFEGSEKA RSVAKETMIE VRKAMGINY

References

[1]

"The Calyptogena magnifica chemoautotrophic symbiont genome." Newton I.L., Woyke T., Auchtung T.A., Dilly G.F., Dutton R.J., Fisher M.C., Fontanez K.M., Lau E., Stewart F.J., Richardson P.M., Barry K.W., Saunders E., Detter J.C., Wu D., Eisen J.A., Cavanaugh C.M. Science 315:998-1000(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Cm EMBL ABL02114.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000488 Genomic DNA. Translation: ABL02114.1.
RefSeq	YP_903585.1. NC_008610.1.
3D structure databases
ProteinModelPortal	A1AW07.
ModBase	Search...
Protein-protein interaction databases
STRING	413404.Rmag_0338.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABL02114; ABL02114; Rmag_0338.
GeneID	4554626.
KEGG	rma:Rmag_0338.
PATRIC	32000319. VBICanRut45856_0384.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0180.
HOGENOM	HOG000059941.
KO	K01867.
OMA	MRESEES.
ProtClustDB	PRK12283.
Enzyme and pathway databases
BioCyc	CRUT413404:GHM7-379-MONOMER.
Family and domain databases
Gene3D	3.40.50.620. 2 hits.
InterPro	IPR001412. aa-tRNA-synth_I_CS. IPR002305. aa-tRNA-synth_Ic. IPR014729. Rossmann-like_a/b/a_fold. IPR002306. Trp-tRNA-ligase. [Graphical view]
PANTHER	PTHR10055. PTHR10055. 1 hit.
Pfam	PF00579. tRNA-synt_1b. 2 hits. [Graphical view]
PRINTS	PR01039. TRNASYNTHTRP.
TIGRFAMs	TIGR00233. trpS. 1 hit.
PROSITE	PS00178. AA_TRNA_LIGASE_I. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1AW07_RUTMC

Accession

Primary (citable) accession number: A1AW07

Entry history

Integrated into UniProtKB/TrEMBL:	January 23, 2007
Last sequence update:	January 23, 2007
Last modified:	May 1, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)