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A1AS78 (A1AS78_PELPD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608
Gene names
Ordered Locus Names:Ppro_2594 EMBL ABL00199.1
OrganismPelobacter propionicus (strain DSM 2379) [Complete proteome] [HAMAP] EMBL ABL00199.1
Taxonomic identifier338966 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Deltaproteobacteria › Desulfuromonadales › Pelobacteraceae › Pelobacter ›

Protein attributes

Sequence length433 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622 EMBL ABL00199.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A1AS78 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: 7C629D59050D1FB3

FASTA43347,276
        10         20         30         40         50         60 
MVERGGRGGA SNSQESLAFP IPDHLSPFPL FPFTAAKRHA NKRNWIYLPV VRSFALLYDS 

        70         80         90        100        110        120 
RPTFAEIDLS ALRHNFQLIR SSVSPQAELL AVVKADAYGH GFMDISRELE RLGVNAFGVA 

       130        140        150        160        170        180 
FLAEAIQLRK AGIDRPILLL GGVYPGQERK CIGYNISTIV FNLEQARALD RAAAKLFRKA 

       190        200        210        220        230        240 
QLHLKVDTGM GRLGIPYAEV PSFLRELAAL PHISLEGVVS HFASADELNE SGRYFSRLQA 

       250        260        270        280        290        300 
ERFAWALAET RSAGFAPRYV HIANSAAGLL RDIPGCNLVR PGIALYGALP SPDFQGQLDL 

       310        320        330        340        350        360 
RPVMRLKSRI AMLKWVEPGT PISYGRRFTT GGRTLIASVP VGYADGYVRA LTNRGEALVR 

       370        380        390        400        410        420 
GERARVAGTV CMDWIMLDVT GVKGVSVGDP VVLMGPDDSG NCIHAEELAE AAGTIPYEIF 

       430 
CGISKRVPRV YLS

« Hide

References

[1]"Complete sequence of chromosome of Pelobacter propionicus DSM 2379."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Kim E., Lovley D., Richardson P.
Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 2379 EMBL ABL00199.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000482 Genomic DNA. Translation: ABL00199.1.
RefSeqYP_902256.1. NC_008609.1.

3D structure databases

ProteinModelPortalA1AS78.
ModBaseSearch...

Protein-protein interaction databases

STRING338966.Ppro_2594.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABL00199; ABL00199; Ppro_2594.
GeneID4572927.
KEGGppd:Ppro_2594.
PATRIC22898289. VBIPelPro64470_2750.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAEGMYTHF.
ProtClustDBCLSK827943.

Enzyme and pathway databases

BioCycPPRO338966:GHL0-2657-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1AS78_PELPD
AccessionPrimary (citable) accession number: A1AS78
Entry history
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: May 1, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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