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Protein

Selenide, water dikinase

Gene

selD

Organism
Pelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Synthesizes selenophosphate from selenide and ATP.UniRule annotation

Catalytic activityi

ATP + selenide + H2O = AMP + selenophosphate + phosphate.UniRule annotation

Cofactori

Mg2+UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei17UniRule annotation1
Sitei20Important for catalytic activityUniRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi229 – 235ATPUniRule annotation7

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionKinase, Transferase
LigandATP-binding, Magnesium, Nucleotide-binding, Selenium

Names & Taxonomyi

Protein namesi
Recommended name:
Selenide, water dikinaseUniRule annotation (EC:2.7.9.3UniRule annotation)
Alternative name(s):
Selenium donor proteinUniRule annotation
Selenophosphate synthaseUniRule annotation
Gene namesi
Name:selDUniRule annotation
Ordered Locus Names:Ppro_1707
OrganismiPelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1)
Taxonomic identifieri338966 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesDesulfuromonadaceaePelobacter
Proteomesi
  • UP000006732 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000516001 – 348Selenide, water dikinaseAdd BLAST348

Interactioni

Protein-protein interaction databases

STRINGi338966.Ppro_1707.

Structurei

3D structure databases

ProteinModelPortaliA1APP9.
SMRiA1APP9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the selenophosphate synthase 1 family. Class I subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105D4F. Bacteria.
COG0709. LUCA.
HOGENOMiHOG000219299.
KOiK01008.
OMAiGCIPGGT.
OrthoDBiPOG091H01TK.

Family and domain databases

CDDicd02195. SelD. 1 hit.
Gene3Di3.30.1330.10. 1 hit.
3.90.650.10. 1 hit.
HAMAPiMF_00625. SelD. 1 hit.
InterProiView protein in InterPro
IPR010918. AIR_synth_C_dom.
IPR016188. PurM-like_N.
IPR023061. SelD_I.
IPR004536. SPS/SelD.
PANTHERiPTHR10256. PTHR10256. 1 hit.
PfamiView protein in Pfam
PF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
PIRSFiPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMiSSF55326. SSF55326. 1 hit.
SSF56042. SSF56042. 1 hit.
TIGRFAMsiTIGR00476. selD. 1 hit.

Sequencei

Sequence statusi: Complete.

A1APP9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDTTIRLTQ TVKGAGCAAK LAPGDLDRAL CGLDLPVDPN LLVGLERADD
60 70 80 90 100
AGVYRISDDL ALVQTIDFFP PMVDDPYSFG QIAAANALSD IYAMGGVPKT
110 120 130 140 150
AMNVVAFPAK TMDISVLRSV IEGGLDKMRE AGVVLVGGHT VEDSELKYGL
160 170 180 190 200
SVTGFIHPDR ILTKKNLQTG DCLILTKPLG TGIVSTAIKA GLAGSDLTER
210 220 230 240 250
VIRNMTALNR DAALVMGDFT VHACTDITGF GFLGHLAEMV VDSGCGVRII
260 270 280 290 300
AADVPHYPEA LEWADMGLIP GGAYNNRDFR GMFVDFGAAV SRRFRDLLFD
310 320 330 340
PQTSGGLLIA VAPNEAEQLV AALKATGIEC AAVVGEVVEE PLERIVVE
Length:348
Mass (Da):36,778
Last modified:January 23, 2007 - v1
Checksum:i544231A42EC3A7E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000482 Genomic DNA. Translation: ABK99319.1.
RefSeqiWP_011735596.1. NC_008609.1.

Genome annotation databases

EnsemblBacteriaiABK99319; ABK99319; Ppro_1707.
KEGGippd:Ppro_1707.

Similar proteinsi

Entry informationi

Entry nameiSELD_PELPD
AccessioniPrimary (citable) accession number: A1APP9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 23, 2007
Last modified: August 30, 2017
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families