A1AMJ0 (A1AMJ0_PELPD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pyridoxal-dependent decarboxylase EMBL ABK98560.1

Gene names

Ordered Locus Names:

Ppro_0931 EMBL ABK98560.1

Organism

Pelobacter propionicus (strain DSM 2379) [Complete proteome] [HAMAP] EMBL ABK98560.1

Taxonomic identifier

338966 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfuromonadales › Pelobacteraceae › Pelobacter › Pelobacter propionicus

Protein attributes

Sequence length	567 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1AMJ0 [UniParc]. Last modified January 23, 2007. Version 1. Checksum: F601AEAB63FE23B3	FASTA	567	63,406
	10 20 30 40 50 60 MPKKRDAARA NLETLYRIFT VPEAPDSTLG AIDQAIADDV IGFLQTHIVA VEHDLEEIEA 70 80 90 100 110 120 YYSSPVIPEE PTYVSEYTEF VKRNLVAQSV HTAAPGFVGH MTSALPYFML PLARLMTALN 130 140 150 160 170 180 QNLVKVETSK AFTPMERQVL AMLHRLVYRR PDDFYPPWIH NSQHALGAFC SGGTIANVTA 190 200 210 220 230 240 LWVARNRLFA PSRTFGGIAR EGLFRALKHH GCDGIAVLVS ERGHYSFGKA TDLLGFGRDN 250 260 270 280 290 300 LIKVKTDGHN RIDLKLLREE YRRLRDRNIL PLALVGIAGT TETGNVDPLE AMADFAQEIG 310 320 330 340 350 360 CHFHVDAAWG GPTLFSDRYR SLLAGIERAD SVTIDGHKQL YVPMGAGMVV FKDPTAQSAI 370 380 390 400 410 420 EHHANYILRR GSKDLGSHTL EGSRPGMAML VHAGFCIIGR KGYELLIDRG IERARTFAEM 430 440 450 460 470 480 VRSHPDFELT SEPELNILTY RFSPAKVQQA LARATDEQRP YINALLDQVN QQLQKHQREA 490 500 510 520 530 540 GKTFVSRTRL CVGPRQEEFT VLRAVLANPL TTDEIMEAIL AEQCEIARTP EIQALLRQIE 550 560 RRCAGGERDE PLQLQDYPGE LDELDES

References

[1]

"Complete sequence of chromosome of Pelobacter propionicus DSM 2379." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. , Land M., Hauser L., Kyrpides N., Kim E., Lovley D., Richardson P. Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 2379 EMBL ABK98560.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000482 Genomic DNA. Translation: ABK98560.1.
RefSeq	YP_900618.1. NC_008609.1.
3D structure databases
ProteinModelPortal	A1AMJ0.
ModBase	Search...
Protein-protein interaction databases
STRING	338966.Ppro_0931.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABK98560; ABK98560; Ppro_0931.
GeneID	4574586.
KEGG	ppd:Ppro_0931.
PATRIC	22894927. VBIPelPro64470_1095.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000282553.
KO	K01580.
OMA	CHFHVDA.
ProtClustDB	CLSK874231.
Enzyme and pathway databases
BioCyc	PPRO338966:GHL0-997-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR022517. Asp_decarboxylase_pyridox. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1AMJ0_PELPD

Accession

Primary (citable) accession number: A1AMJ0

Entry history

Integrated into UniProtKB/TrEMBL:	January 23, 2007
Last sequence update:	January 23, 2007
Last modified:	May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)