Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Isocitrate dehydrogenase (NADP)

Gene

Ppro_0452

Organism
Pelobacter propionicus (strain DSM 2379)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciPPRO338966:GHL0-456-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Isocitrate dehydrogenase (NADP)Imported (EC:1.1.1.42Imported)
Gene namesi
Ordered Locus Names:Ppro_0452Imported
OrganismiPelobacter propionicus (strain DSM 2379)Imported
Taxonomic identifieri338966 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesPelobacteraceaePelobacter
ProteomesiUP000006732 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi338966.Ppro_0452.

Structurei

3D structure databases

ProteinModelPortaliA1AL64.
SMRiA1AL64. Positions 10-470.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the isocitrate and isopropylmalate dehydrogenases family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0538.
HOGENOMiHOG000021113.
KOiK00031.
OMAiFRDWGYE.
OrthoDBiEOG6SNDTP.

Family and domain databases

Gene3Di3.40.718.10. 2 hits.
InterProiIPR001804. Isocitrate/isopropylmalate_DH.
IPR004439. Isocitrate_DH_NADP_dimer_prok.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERiPTHR11835. PTHR11835. 1 hit.
PfamiPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00183. prok_nadp_idh. 1 hit.

Sequencei

Sequence statusi: Complete.

A1AL64-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNYTYLTVPQ GEKISMGSDG KLRVPANPII PFIEGDGTGP DIWRAAKRVL
60 70 80 90 100
DAAVARAYGG ARKISWMEVF AGEKSFNMFR ESMGDRAWLP DETVDAYREF
110 120 130 140 150
LVGIKGPLTT PIGGGIRSLN VALRQLLDLY VCLRPVRYFQ GVPSPVKKPQ
160 170 180 190 200
DVDMVIFREN TEDIYAGIEW MQGTTECEKL KRFLLEEMKV TNIRFPGSVS
210 220 230 240 250
LGVKPISKEG SQRLVRAAID YALEQGRRSV TLVHKGNIMK YTEGAFKEWG
260 270 280 290 300
YQVATEQFRD RVVTERESWI IANQDKNPTM APEENARLIE PGYDLMTPNQ
310 320 330 340 350
RQRIVDEVQA ALGLMATHGN GQWKKLLLIK DSIADIALQQ VLTRAKEFDV
360 370 380 390 400
IATMNLEGDF LSDALAAQVG GIGIAPGANI NYLTGHAIFE ATHGTAPKYA
410 420 430 440 450
NQDKVNPGSV ILSGVMMLEY LGWREAADLV IAAIDRTISQ KKVTYDFERL
460 470
MEGATLVSCS GFADALIGNM
Length:470
Mass (Da):52,095
Last modified:January 23, 2007 - v1
Checksum:i90B3BA831B3F013F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000482 Genomic DNA. Translation: ABK98084.1.
RefSeqiWP_011734398.1. NC_008609.1.
YP_900142.1. NC_008609.1.

Genome annotation databases

EnsemblBacteriaiABK98084; ABK98084; Ppro_0452.
KEGGippd:Ppro_0452.
PATRICi22893937. VBIPelPro64470_0607.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000482 Genomic DNA. Translation: ABK98084.1.
RefSeqiWP_011734398.1. NC_008609.1.
YP_900142.1. NC_008609.1.

3D structure databases

ProteinModelPortaliA1AL64.
SMRiA1AL64. Positions 10-470.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi338966.Ppro_0452.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK98084; ABK98084; Ppro_0452.
KEGGippd:Ppro_0452.
PATRICi22893937. VBIPelPro64470_0607.

Phylogenomic databases

eggNOGiCOG0538.
HOGENOMiHOG000021113.
KOiK00031.
OMAiFRDWGYE.
OrthoDBiEOG6SNDTP.

Enzyme and pathway databases

BioCyciPPRO338966:GHL0-456-MONOMER.

Family and domain databases

Gene3Di3.40.718.10. 2 hits.
InterProiIPR001804. Isocitrate/isopropylmalate_DH.
IPR004439. Isocitrate_DH_NADP_dimer_prok.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERiPTHR11835. PTHR11835. 1 hit.
PfamiPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00183. prok_nadp_idh. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Pelobacter propionicus DSM 2379."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F.
    , Land M., Hauser L., Kyrpides N., Kim E., Lovley D., Richardson P.
    Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 2379Imported.

Entry informationi

Entry nameiA1AL64_PELPD
AccessioniPrimary (citable) accession number: A1AL64
Entry historyi
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: April 29, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.