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A1AJK1 (A1AJK1_ECOK1) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative regulatory protein GclR EMBL ABJ03841.1
Gene names
Name:gclR EMBL ABJ03841.1
Ordered Locus Names:Ecok1_43470
ORF Names:APECO1_2096 EMBL ABJ03841.1
OrganismEscherichia coli O1:K1 / APEC [Complete proteome] [HAMAP]
Taxonomic identifier405955 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length260 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
A1AJK1 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: 25469726D256A55F

FASTA26029,651
        10         20         30         40         50         60 
MAKFAANLSM LFTEHPFIER FAQASHAGFH GVEYLFPYDF STDELASQLH QHNLTQVLFN 

        70         80         90        100        110        120 
LPAGNWQEGE RGIACHPSRA KEFQEGVCRA IEYAQALNCS QVNCLAGKHP GGYSHEQCHE 

       130        140        150        160        170        180 
TLVENLRYAV DKLASHGIKL VLEAINTKDI PGFFVNNTRQ ALNIIHDVNH PDFRYQYDIY 

       190        200        210        220        230        240 
HMQIMEGNIA TTIKNNLNNI EHIQLADNPG RHEPGTGEIN YPWLLNYIDQ IGYQGWIGCE 

       250        260 
YVPSTTTTES LRWLKNETQF

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References

[1]"The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes."
Johnson T.J., Kariyawasam S., Wannemuehler Y., Mangiamele P., Johnson S.J., Doetkott C., Skyberg J.A., Lynne A.M., Johnson J.R., Nolan L.K.
J. Bacteriol. 189:3228-3236(2007) [PubMed: 17293413] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000468 Genomic DNA. Translation: ABJ03841.1.
RefSeqYP_859965.1. NC_008563.1.

3D structure databases

ProteinModelPortalA1AJK1.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1AJK1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000038741; EBESCP00000037258; EBESCG00000037791.
GeneID4492160.
GenomeReviewsGene locus Ecok1_43470 in contig CP000468_GR.
KEGGecv:APECO1_2096.
PATRIC18221390. VBIEscCol127180_4887.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3622.
GeneTreeEBGT00050000008290.
HOGENOMHBG582536.
OMAMLFTEQD.
ProtClustDBCLSK773661.

Family and domain databases

InterProIPR017643. Hydroxypyruvate_isomerase.
IPR013022. Xyl_isomerase-like_TIM-brl.
IPR012307. Xyl_isomerase_TIM-brl.
[Graphical view]
Gene3DG3DSA:3.20.20.150. Xyl_isomerase-like_TIM-brl. 1 hit.
KOK01816.
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMSSF51658. Xyl_isomerase-like_TIM-brl. 1 hit.
TIGRFAMsTIGR03234. OH-pyruv-isom. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1AJK1_ECOK1
AccessionPrimary (citable) accession number: A1AJK1
Entry history
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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