A1AIH1 (A1AIH1_ECOK1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA-binding protein HU-alpha EMBL ABJ03461.1

Gene names

Ordered Locus Names:	Ecok1_39670
ORF Names:	APECO1_2475 EMBL ABJ03461.1

Organism

Escherichia coli O1:K1 / APEC [Complete proteome] [HAMAP]

Taxonomic identifier

405955 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	90 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the bacterial histone-like protein family. RuleBase RU003939

Ontologies

Keywords
Ligand	DNA-binding EMBL ABJ03461.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1AIH1 [UniParc]. Last modified January 23, 2007. Version 1. Checksum: 6B5B8536FDBD13DC	FASTA	90	9,535
	10 20 30 40 50 60 MNKTQLIDVI AEKAELSKTQ AKAALESTLA AITESLKEGD AVQLVGFGTF KVNHRAERTG 70 80 90 RNPQTGKEIK IAAANVPAFV SGKALKDAVK

References

[1]

"The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes." Johnson T.J., Kariyawasam S., Wannemuehler Y., Mangiamele P., Johnson S.J., Doetkott C., Skyberg J.A., Lynne A.M., Johnson J.R., Nolan L.K. J. Bacteriol. 189:3228-3236(2007) [PubMed: 17293413] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000468 Genomic DNA. Translation: ABJ03461.1.
RefSeq	YP_859585.1. NC_008563.1.
3D structure databases
ProteinModelPortal	A1AIH1.
SMR	A1AIH1. Positions 1-90.
ModBase	Search...
Protein-protein interaction databases
STRING	A1AIH1.
Proteomic databases
PRIDE	A1AIH1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000039572; EBESCP00000038089; EBESCG00000038622.
GeneID	4493807.
GenomeReviews	Gene locus Ecok1_39670 in contig CP000468_GR.
KEGG	ecv:APECO1_2475.
PATRIC	18220535. VBIEscCol127180_4469.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0776.
GeneTree	EBGT00050000010314.
HOGENOM	HBG705085.
OMA	MNSITYE.
ProtClustDB	PRK10753.
Family and domain databases
InterPro	IPR023630. DNA-bd_HU/IHF. IPR000119. Hist_DNA-bd_bac. IPR020816. Histone-like_DNA-bd_CS. IPR010992. IHF-like_DNA-bd. [Graphical view]
Gene3D	G3DSA:4.10.520.10. Hist_DNA_bd_bac. 1 hit.
KO	K05787.
Pfam	PF00216. Bac_DNA_binding. 1 hit. [Graphical view]
PRINTS	PR01727. DNABINDINGHU.
SMART	SM00411. BHL. 1 hit. [Graphical view]
SUPFAM	SSF47729. IHF_like_DNA_bnd. 1 hit.
PROSITE	PS00045. HISTONE_LIKE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1AIH1_ECOK1

Accession

Primary (citable) accession number: A1AIH1

Entry history

Integrated into UniProtKB/TrEMBL:	January 23, 2007
Last sequence update:	January 23, 2007
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)