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A1AB81 (A1AB81_ECOK1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:gadA EMBL ABJ00921.1
ORF Names:APECO1_621 EMBL ABJ00921.1
OrganismEscherichia coli O1:K1 / APEC [Complete proteome] [HAMAP] EMBL ABJ00921.1
Taxonomic identifier405955 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length430 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A1AB81 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: 8A9494AA2356751E

FASTA43048,533
        10         20         30         40         50         60 
MRDDVAFQII NDELYLDGNA RQNLATFCQT WDDXNVHKLM DLSINKNWID KEEYPQSAAI 

        70         80         90        100        110        120 
DLRCVNMVAD LWHAPAPKNG QAVGTNTIGS SEACMLGGMA MKWRWRKRME AAGKPTNKPN 

       130        140        150        160        170        180 
LVCGPVQICW HKFARYWDVE LREIPMRPGQ LFMDPKRMIE ACDENTIGVV PTFGVTYTGN 

       190        200        210        220        230        240 
YEFPQPLHDA LDKFQADTGI DIDMHIDAAS GGFLAPFVAP DIVWDFRLPR VKSISASGHK 

       250        260        270        280        290        300 
FGLAPLGCGW VIWRDEEALP QELVFNVDYL GGQIGTFAIN FSRPAGQVIA QYYEFLRLGR 

       310        320        330        340        350        360 
EGYTKVQNAS YQVAAYLADE IAKLGPYEFI CTGRPDEGIP AVCFKLKDGE DPGYTLYDLS 

       370        380        390        400        410        420 
ERLRLRGWQV PAFTLGGEAT DIVVMRIMCR RGFEMDFAEL LLEDYKASLK YLSDHPKLQG 

       430 
IAQQNSFKHT 

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References

[1]"The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes."
Johnson T.J., Kariyawasam S., Wannemuehler Y., Mangiamele P., Johnson S.J., Doetkott C., Skyberg J.A., Lynne A.M., Johnson J.R., Nolan L.K.
J. Bacteriol. 189:3228-3236(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: APEC O1 EMBL ABJ00921.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000468 Genomic DNA. Translation: ABJ00921.1.
RefSeqYP_852635.1. NC_008563.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABJ00921; ABJ00921; APECO1_621.
GeneID4494407.
KEGGecv:APECO1_621.
PATRIC18214666. VBIEscCol127180_1612.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OrthoDBEOG6TFCPW.
ProtClustDBCLSK880040.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1AB81_ECOK1
AccessionPrimary (citable) accession number: A1AB81
Entry history
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: April 16, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)