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A1AB32

- OPGD_ECOK1

UniProt

A1AB32 - OPGD_ECOK1

Protein

Glucans biosynthesis protein D

Gene

mdoD

Organism
Escherichia coli O1:K1 / APEC
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (23 Jan 2007)
      Previous versions | rss
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    Functioni

    Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs).UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. carbohydrate binding Source: InterPro
    2. catalytic activity Source: InterPro

    GO - Biological processi

    1. glucan biosynthetic process Source: UniProtKB-HAMAP

    Enzyme and pathway databases

    UniPathwayiUPA00637.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glucans biosynthesis protein DUniRule annotation
    Gene namesi
    Name:mdoDUniRule annotation
    Synonyms:opgDUniRule annotation
    Ordered Locus Names:Ecok1_13780
    ORF Names:APECO1_572
    OrganismiEscherichia coli O1:K1 / APEC
    Taxonomic identifieri405955 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000008216: Chromosome

    Subcellular locationi

    Periplasm UniRule annotation

    GO - Cellular componenti

    1. periplasmic space Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Periplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3232Tat-type signalUniRule annotationAdd
    BLAST
    Chaini33 – 551519Glucans biosynthesis protein DPRO_1000064545Add
    BLAST

    Post-translational modificationi

    Predicted to be exported by the Tat system. The position of the signal peptide cleavage has not been experimentally proven.

    Interactioni

    Protein-protein interaction databases

    STRINGi405955.APECO1_572.

    Structurei

    3D structure databases

    ProteinModelPortaliA1AB32.
    SMRiA1AB32. Positions 44-538.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the OpgD/OpgG family.UniRule annotation

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG3131.
    HOGENOMiHOG000288262.
    OMAiCTSMYQV.
    OrthoDBiEOG6FZ487.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.70.98.10. 1 hit.
    HAMAPiMF_01068. MdoD_OpgD.
    InterProiIPR011013. Gal_mutarotase_SF_dom.
    IPR023724. Glucan_biosyn_MdoD.
    IPR007444. Glucan_biosyn_MdoG_C.
    IPR014438. Glucan_biosyn_MdoGD.
    IPR014718. Glyco_hydro-type_carb-bd_sub.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR006311. TAT_signal.
    IPR019546. TAT_signal_bac_arc.
    [Graphical view]
    PfamiPF04349. MdoG. 1 hit.
    [Graphical view]
    PIRSFiPIRSF006281. MdoG. 1 hit.
    SUPFAMiSSF74650. SSF74650. 1 hit.
    SSF81296. SSF81296. 1 hit.
    TIGRFAMsiTIGR01409. TAT_signal_seq. 1 hit.
    PROSITEiPS51318. TAT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A1AB32-1 [UniParc]FASTAAdd to Basket

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    MDRRRFIKGS MAMAAVCGTS GIASLFSQAA FAADSDIADG QTQRFDFSIL    50
    QSMAHDLAQT AWRGAPRPLP DTLATMTPQA YNSIQYDAEK SLWHNVENRQ 100
    LDAQFFHMGM GFRRRVRMFS VDPATHLARE IHFRPELFKY NDAGVDTKQL 150
    EGQSDLGFAG FRVFKAPELA RRDVVSFLGA SYFRAVDDTY QYGLSARGLA 200
    IDTYTDSKEE FPDFTAFWFD TVKPGATTFT VYALLDSASI TGAYKFTIHC 250
    EKNQVIMDVE NHLYARKDIK QLGIAPMTSM FSCGTNERRM CDTIHPQIHD 300
    SDRLSMWRGN GEWICRPLNN PQKLQFNAYT DNNPKGFGLL QLDRDFSHYQ 350
    DIMGWYNKRP SLWVEPRNKW GKGTIGLMEI PTTGETLDNI VCFWQPEKAV 400
    KAGDEFAFQY RLYWSAQPPV HCPLARVMAT RTGMGGFPEG WAPGEHYPEK 450
    WARRFAVDFV GGDLKAAAPK GIEPVITLSS GEAKQIEILY IEPIDGYRIQ 500
    FDWYPTSDST DPVDMRMYLR CQGDAISETW LYQYFPPAPD KRQYVDDRVM 550
    S 551
    Length:551
    Mass (Da):62,795
    Last modified:January 23, 2007 - v1
    Checksum:iE4A6DC9004C4E893
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000468 Genomic DNA. Translation: ABJ00872.1.
    RefSeqiYP_852586.1. NC_008563.1.

    Genome annotation databases

    EnsemblBacteriaiABJ00872; ABJ00872; APECO1_572.
    GeneIDi4491664.
    KEGGiecv:APECO1_572.
    PATRICi18214541. VBIEscCol127180_1550.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000468 Genomic DNA. Translation: ABJ00872.1 .
    RefSeqi YP_852586.1. NC_008563.1.

    3D structure databases

    ProteinModelPortali A1AB32.
    SMRi A1AB32. Positions 44-538.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 405955.APECO1_572.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABJ00872 ; ABJ00872 ; APECO1_572 .
    GeneIDi 4491664.
    KEGGi ecv:APECO1_572.
    PATRICi 18214541. VBIEscCol127180_1550.

    Phylogenomic databases

    eggNOGi COG3131.
    HOGENOMi HOG000288262.
    OMAi CTSMYQV.
    OrthoDBi EOG6FZ487.

    Enzyme and pathway databases

    UniPathwayi UPA00637 .

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.70.98.10. 1 hit.
    HAMAPi MF_01068. MdoD_OpgD.
    InterProi IPR011013. Gal_mutarotase_SF_dom.
    IPR023724. Glucan_biosyn_MdoD.
    IPR007444. Glucan_biosyn_MdoG_C.
    IPR014438. Glucan_biosyn_MdoGD.
    IPR014718. Glyco_hydro-type_carb-bd_sub.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR006311. TAT_signal.
    IPR019546. TAT_signal_bac_arc.
    [Graphical view ]
    Pfami PF04349. MdoG. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF006281. MdoG. 1 hit.
    SUPFAMi SSF74650. SSF74650. 1 hit.
    SSF81296. SSF81296. 1 hit.
    TIGRFAMsi TIGR01409. TAT_signal_seq. 1 hit.
    PROSITEi PS51318. TAT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes."
      Johnson T.J., Kariyawasam S., Wannemuehler Y., Mangiamele P., Johnson S.J., Doetkott C., Skyberg J.A., Lynne A.M., Johnson J.R., Nolan L.K.
      J. Bacteriol. 189:3228-3236(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiOPGD_ECOK1
    AccessioniPrimary (citable) accession number: A1AB32
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 5, 2008
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3