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Protein

Phosphatase NudJ

Gene

nudJ

Organism
Escherichia coli O1:K1 / APEC
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Cofactori

Mg2+By similarity

GO - Molecular functioni

Keywordsi

Molecular functionHydrolase
LigandMagnesium

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphatase NudJ (EC:3.6.1.-)
Gene namesi
Name:nudJ
Ordered Locus Names:Ecok1_10240
ORF Names:APECO1_216
OrganismiEscherichia coli O1:K1 / APEC
Taxonomic identifieri405955 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000008216 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003426421 – 153Phosphatase NudJAdd BLAST153

Interactioni

Subunit structurei

Monomer.By similarity

Structurei

Secondary structure

1153
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi5 – 14Combined sources10
Beta strandi17 – 25Combined sources9
Beta strandi28 – 32Combined sources5
Beta strandi34 – 37Combined sources4
Helixi44 – 56Combined sources13
Beta strandi64 – 71Combined sources8
Beta strandi79 – 87Combined sources9
Beta strandi103 – 107Combined sources5
Helixi109 – 113Combined sources5
Beta strandi118 – 120Combined sources3
Helixi122 – 131Combined sources10
Helixi138 – 141Combined sources4
Beta strandi143 – 145Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3DKUX-ray2.69A/B/C/D/E/F/G/H1-153[»]
3SHDX-ray2.50A/B/C/D/E/F/G/H/I/J/K/L1-153[»]
ProteinModelPortaliA1AA28.
SMRiA1AA28.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiA1AA28.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 131Nudix hydrolasePROSITE-ProRule annotationAdd BLAST129

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi36 – 57Nudix boxAdd BLAST22

Sequence similaritiesi

Belongs to the Nudix hydrolase family. NudJ subfamily.Curated

Phylogenomic databases

HOGENOMiHOG000256353.
KOiK12152.
OMAiRWKPNVT.

Family and domain databases

CDDicd03675. Nudix_Hydrolase_2. 1 hit.
Gene3Di3.90.79.10. 1 hit.
InterProiView protein in InterPro
IPR020476. Nudix_hydrolase.
IPR020084. NUDIX_hydrolase_CS.
IPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
IPR033713. NudJ.
PfamiView protein in Pfam
PF00293. NUDIX. 1 hit.
PRINTSiPR00502. NUDIXFAMILY.
SUPFAMiSSF55811. SSF55811. 1 hit.
PROSITEiView protein in PROSITE
PS51462. NUDIX. 1 hit.
PS00893. NUDIX_BOX. 1 hit.

Sequencei

Sequence statusi: Complete.

A1AA28-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFKPHVTVAC VVHAEGKFLV VEETINGKAL WNQPAGHLEA DETLVEAAAR
60 70 80 90 100
ELWEETGISA QPQHFIRMHQ WIAPDKTPFL RFLFAIELEQ ICPTQPHDSD
110 120 130 140 150
IDCCRWVSAE EILQASNLRS PLVAESIRCY QSGQRYPLEM IGDFNWPFTK

GVI
Length:153
Mass (Da):17,433
Last modified:January 23, 2007 - v1
Checksum:iBDB7423E97D6735A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000468 Genomic DNA. Translation: ABJ00518.1.
RefSeqiWP_000476093.1. NC_008563.1.

Genome annotation databases

EnsemblBacteriaiABJ00518; ABJ00518; APECO1_216.
KEGGiecv:APECO1_216.
PATRICi18213704. VBIEscCol127180_1138.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000468 Genomic DNA. Translation: ABJ00518.1.
RefSeqiWP_000476093.1. NC_008563.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3DKUX-ray2.69A/B/C/D/E/F/G/H1-153[»]
3SHDX-ray2.50A/B/C/D/E/F/G/H/I/J/K/L1-153[»]
ProteinModelPortaliA1AA28.
SMRiA1AA28.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABJ00518; ABJ00518; APECO1_216.
KEGGiecv:APECO1_216.
PATRICi18213704. VBIEscCol127180_1138.

Phylogenomic databases

HOGENOMiHOG000256353.
KOiK12152.
OMAiRWKPNVT.

Miscellaneous databases

EvolutionaryTraceiA1AA28.

Family and domain databases

CDDicd03675. Nudix_Hydrolase_2. 1 hit.
Gene3Di3.90.79.10. 1 hit.
InterProiView protein in InterPro
IPR020476. Nudix_hydrolase.
IPR020084. NUDIX_hydrolase_CS.
IPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
IPR033713. NudJ.
PfamiView protein in Pfam
PF00293. NUDIX. 1 hit.
PRINTSiPR00502. NUDIXFAMILY.
SUPFAMiSSF55811. SSF55811. 1 hit.
PROSITEiView protein in PROSITE
PS51462. NUDIX. 1 hit.
PS00893. NUDIX_BOX. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiNUDJ_ECOK1
AccessioniPrimary (citable) accession number: A1AA28
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 1, 2008
Last sequence update: January 23, 2007
Last modified: February 15, 2017
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.