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A1A9F8 (A1A9F8_ECOK1) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Lysozyme RuleBase RU003788
EC=3.2.1.17 RuleBase RU003788
Gene names
Ordered Locus Names:Ecok1_08040
ORF Names:APECO1_4473 EMBL ABJ00298.1
OrganismEscherichia coli O1:K1 / APEC [Complete proteome] [HAMAP]
Taxonomic identifier405955 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length165 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. RuleBase RU003788

Sequence similarities

Belongs to the glycosyl hydrolase 24 family. RuleBase RU003788

Sequences

Sequence LengthMass (Da)Tools
A1A9F8 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: 82388A6A86C2B35E

FASTA16518,538
        10         20         30         40         50         60 
MPVINTHQNI AAFLDMLAVS EGTANHPLTK NRGYDVIVTG LDGKPEIFTD YSDHPFAHGR 

        70         80         90        100        110        120 
PAKVFNRRGE KSTASGRYQQ LYLFWPHYRK QLALPDFSPL SQDRLAIQLI RERGALDDIR 

       130        140        150        160 
AGRIERAISR CRNIWASLPG AGYGQREHSL EKLVTVWRTA GGVPA

« Hide

References

[1]"The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes."
Johnson T.J., Kariyawasam S., Wannemuehler Y., Mangiamele P., Johnson S.J., Doetkott C., Skyberg J.A., Lynne A.M., Johnson J.R., Nolan L.K.
J. Bacteriol. 189:3228-3236(2007) [PubMed: 17293413] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000468 Genomic DNA. Translation: ABJ00298.1.
RefSeqYP_852012.1. NC_008563.1.

3D structure databases

ProteinModelPortalA1A9F8.
SMRA1A9F8. Positions 7-164.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1A9F8.

Protein family/group databases

CAZyGH104. Glycoside Hydrolase Family 104.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000037147; EBESCP00000035664; EBESCG00000036197.
GeneID4492817.
GenomeReviewsGene locus Ecok1_08040 in contig CP000468_GR.
KEGGecv:APECO1_4473.
PATRIC18213208. VBIEscCol127180_0892.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4678.
GeneTreeEBGT00050000012297.
HOGENOMHBG683753.
OMACNNIWAS.
ProtClustDBCLSK939539.

Family and domain databases

InterProIPR002196. Glyco_hydro_24.
IPR023346. Lysozyme-like_dom.
[Graphical view]
PfamPF00959. Phage_lysozyme. 1 hit.
[Graphical view]
SUPFAMSSF53955. SSF53955. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1A9F8_ECOK1
AccessionPrimary (citable) accession number: A1A9F8
Entry history
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info