A1A986 (YBJL_ECOK1) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative transport protein YbjL

Gene names

Name:	ybjL
Ordered Locus Names:	Ecok1_07320
ORF Names:	APECO1_1246

Organism

Escherichia coli O1:K1 / APEC [Complete proteome] [HAMAP]

Taxonomic identifier

405955 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	561 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell membrane; Multi-pass membrane protein Potential HAMAP-Rule MF_01015.
Sequence similarities	Belongs to the AAE transporter (TC 2.A.81) family. YbjL subfamily. [View classification] Contains 2 RCK C-terminal domains.

Ontologies

Keywords
Biological process	Transport
Cellular component	Cell membrane Membrane
Domain	Repeat Transmembrane Transmembrane helix
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	potassium ion transport Inferred from electronic annotation. Source: InterPro regulation of potassium ion transport Inferred from electronic annotation. Source: HAMAP
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	cation transmembrane transporter activity Inferred from electronic annotation. Source: InterPro potassium channel regulator activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 561	561	Putative transport protein YbjL HAMAP-Rule MF_01015		PRO_0000329143
Regions
	Transmembrane	8 – 28	21	Helical; Potential
	Transmembrane	32 – 52	21	Helical; Potential
	Transmembrane	66 – 86	21	Helical; Potential
	Transmembrane	94 – 114	21	Helical; Potential
	Transmembrane	158 – 178	21	Helical; Potential
	Transmembrane	383 – 403	21	Helical; Potential
	Transmembrane	406 – 426	21	Helical; Potential
	Transmembrane	451 – 471	21	Helical; Potential
	Transmembrane	475 – 495	21	Helical; Potential
	Transmembrane	540 – 560	21	Helical; Potential
	Domain	200 – 288	89	RCK C-terminal 1
	Domain	292 – 373	82	RCK C-terminal 2

Sequences

	Sequence		Length	Mass (Da)
	A1A986 [UniParc]. Last modified January 23, 2007. Version 1. Checksum: 9FD6F8CA67945F85	FASTA	561	60,351
	10 20 30 40 50 60 MNINVAELLN GNYILLLFVV LALGLCLGKL RLGSIQLGNS IGVLVVSLLL GQQHFSINTD 70 80 90 100 110 120 ALNLGFMLFI FCVGVEAGPN FFSIFFRDGK NYLMLALVMV GSALVIALGL GKLFGWDIGL 130 140 150 160 170 180 TAGMLAGSMT STPVLVGAGD TLRHSGMESR QLSLALDNLS LGYALTYLIG LVSLIVGARY 190 200 210 220 230 240 LPKLQHQDLQ TSAQQIARER GLDTDANRKV YLPVIRAYRV GPELVAWTDG KNLRELGIYR 250 260 270 280 290 300 QTGCYIERIR RNGILANPDG DAVLQMGDEI ALVGYPDAHA RLDPSFRNGK EVFDRDLLDM 310 320 330 340 350 360 RIVTEEVVVK NHNAVGKRLA QLKLTDHGCF LNRVIRSQIE MPIDDNVVLN KGDVLQVSGD 370 380 390 400 410 420 ARRVKTIADR IGFISIHSQV TDLLAFCAFF VIGLMIGMIT FQFSTFSFGM GNAAGLLFAG 430 440 450 460 470 480 IMLGFMRANH PTFGYIPQGA LSMVKEFGLM VFMAGVGLSA GSGINNGLGA IGGQMLIAGL 490 500 510 520 530 540 IVSLVPVVIC FLFGAYVLRM NRALLFGAMM GARTCAPAME IISDTARSNI PALGYAGTYA 550 560 IANVLLTLAG TIIVMVWPGL G

References

[1]

"The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes." Johnson T.J., Kariyawasam S., Wannemuehler Y., Mangiamele P., Johnson S.J., Doetkott C., Skyberg J.A., Lynne A.M., Johnson J.R., Nolan L.K. J. Bacteriol. 189:3228-3236(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000468 Genomic DNA. Translation: ABJ00226.1.
RefSeq	YP_851940.1. NC_008563.1.
3D structure databases
ProteinModelPortal	A1A986.
SMR	A1A986. Positions 216-287.
ModBase	Search...
Protein-protein interaction databases
STRING	405955.APECO1_1246.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABJ00226; ABJ00226; APECO1_1246.
GeneID	4492958.
KEGG	ecv:APECO1_1246.
PATRIC	18213038. VBIEscCol127180_0808.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2985.
HOGENOM	HOG000218047.
KO	K07085.
OMA	CFLNRIV.
ProtClustDB	PRK04972.
Family and domain databases
HAMAP	MF_01015. YbjL.
InterPro	IPR006037. RCK_C. IPR023017. Transp_YbjL_put. IPR006512. YidE_YbjL. [Graphical view]
Pfam	PF06826. Asp-Al_Ex. 2 hits. PF02080. TrkA_C. 2 hits. [Graphical view]
TIGRFAMs	TIGR01625. YidE_YbjL_dupl. 2 hits.
PROSITE	PS51202. RCK_C. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YBJL_ECOK1

Accession

Primary (citable) accession number: A1A986

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 8, 2008
Last sequence update:	January 23, 2007
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program