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A1A8H5 (A1A8H5_ECOK1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ybbQ EMBL ABI99964.1
ORF Names:APECO1_1505 EMBL ABI99964.1
OrganismEscherichia coli O1:K1 / APEC [Complete proteome] [HAMAP] EMBL ABI99964.1
Taxonomic identifier405955 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length292 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A1A8H5 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: A59DBF19CC846B66

FASTA29230,773
        10         20         30         40         50         60 
MKLGFIGLGI MGTPMAINLA RAGHQLHVTT IGPVADELLS LGAVSVETAR QVTDASDIIF 

        70         80         90        100        110        120 
IMVPDTPQVE DVLFGENGCT KASLKGKTIV DMSSISPIET KRFARQVNEL GGDYLDAPVS 

       130        140        150        160        170        180 
GGEIGAREGT LSIMVGGDEA VFERVKPLFE LLGKNITLVG GNGDGQTCKV ANQIIVALNI 

       190        200        210        220        230        240 
EAVSEALLFA SKAGADPVRV RQALMGGFAS SRILEVHGER MIKRTFNPGF KIALHQKDLN 

       250        260        270        280        290 
LALQSAKALA LNLPNTATCQ ELFNTCAANG GSQLDHSALV QALELMANHK LA 

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References

[1]"The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes."
Johnson T.J., Kariyawasam S., Wannemuehler Y., Mangiamele P., Johnson S.J., Doetkott C., Skyberg J.A., Lynne A.M., Johnson J.R., Nolan L.K.
J. Bacteriol. 189:3228-3236(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: APEC O1 EMBL ABI99964.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000468 Genomic DNA. Translation: ABI99964.1.
RefSeqYP_851679.1. NC_008563.1.

3D structure databases

ProteinModelPortalA1A8H5.
SMRA1A8H5. Positions 1-291.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING405955.APECO1_1505.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABI99964; ABI99964; APECO1_1505.
GeneID4493622.
KEGGecv:APECO1_1505.
PATRIC18212422. VBIEscCol127180_0515.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2084.
HOGENOMHOG000219608.
KOK00042.
OMAMGGFANS.
OrthoDBEOG6XDH0X.
ProtClustDBPRK15059.

Family and domain databases

Gene3D1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProIPR002204. 3-OH-isobutyrate_DH-rel_CS.
IPR008927. 6-PGluconate_DH_C-like.
IPR006115. 6PGDH_NADP-bd.
IPR013328. DH_multihelical.
IPR015815. HIBADH-type.
IPR016040. NAD(P)-bd_dom.
IPR006398. Tartro_sem_red.
[Graphical view]
PANTHERPTHR22981. PTHR22981. 1 hit.
PfamPF03446. NAD_binding_2. 1 hit.
[Graphical view]
PIRSFPIRSF000103. HIBADH. 1 hit.
SUPFAMSSF48179. SSF48179. 1 hit.
TIGRFAMsTIGR01505. tartro_sem_red. 1 hit.
PROSITEPS00895. 3_HYDROXYISOBUT_DH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1A8H5_ECOK1
AccessionPrimary (citable) accession number: A1A8H5
Entry history
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: April 16, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)