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Protein
Submitted name:

IP17216p

Gene

RpL23a

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotation

Enzyme and pathway databases

ReactomeiR-DME-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-DME-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-DME-72689. Formation of a pool of free 40S subunits.
R-DME-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-DME-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-DME-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Submitted name:
IP17216pImported
Gene namesi
Name:RpL23aImported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Proteomic databases

PaxDbiA1A6X4.
PRIDEiA1A6X4.

Expressioni

Gene expression databases

BgeeiFBgn0026372.

Interactioni

Protein-protein interaction databases

STRINGi7227.FBpp0072687.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini133 – 179Ribosomal_L23eNInterPro annotationAdd BLAST47

Sequence similaritiesi

Belongs to the universal ribosomal protein uL23 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1751. Eukaryota.
COG0089. LUCA.

Family and domain databases

HAMAPiMF_01369_A. Ribosomal_L23_A. 1 hit.
InterProiView protein in InterPro
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR001014. Ribosomal_L23/L25_CS.
IPR005633. Ribosomal_L23/L25_N.
IPR013025. Ribosomal_L25/23.
PfamiView protein in Pfam
PF00276. Ribosomal_L23. 1 hit.
PF03939. Ribosomal_L23eN. 1 hit.
SUPFAMiSSF54189. SSF54189. 1 hit.
PROSITEiView protein in PROSITE
PS00050. RIBOSOMAL_L23. 1 hit.

Sequencei

Sequence statusi: Fragment.

A1A6X4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
KSAKPGDKKP EQKKTAAAPA AGKKEAAPSA AKPAAAAPKK AAAPAAKKAA
60 70 80 90 100
PAAKKPATAG AAAKKPAAVK TTAAAKAKSK DAKKKVLAGK KPQSVLAKLS
110 120 130 140 150
AKARAAAKAK KGVKPVTKPA KGTAKAKAVA LLNAKKVQKK IIKGAFGTRA
160 170 180 190 200
RKIRTNVHFR RPTTLKLPRS PKYPRKSVPT RNRMDAYNII KYPLTTEAAM
210 220 230 240 250
KKIEDNNTLV FLTHLRANKN HVRAAVRKLY DIKVAKVNVL IRPDGQKKAY
260
VRLARDYDAL DIANKIGII
Length:269
Mass (Da):28,554
Last modified:January 23, 2007 - v1
Checksum:iCC0186B183558C2D
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT029645 mRNA. Translation: ABL75704.1.

Genome annotation databases

EnsemblMetazoaiFBtr0072805; FBpp0072687; FBgn0026372.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT029645 mRNA. Translation: ABL75704.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7227.FBpp0072687.

Proteomic databases

PaxDbiA1A6X4.
PRIDEiA1A6X4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0072805; FBpp0072687; FBgn0026372.

Phylogenomic databases

eggNOGiKOG1751. Eukaryota.
COG0089. LUCA.

Enzyme and pathway databases

ReactomeiR-DME-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-DME-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-DME-72689. Formation of a pool of free 40S subunits.
R-DME-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-DME-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-DME-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

ChiTaRSiRpL23A. fly.

Gene expression databases

BgeeiFBgn0026372.

Family and domain databases

HAMAPiMF_01369_A. Ribosomal_L23_A. 1 hit.
InterProiView protein in InterPro
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR001014. Ribosomal_L23/L25_CS.
IPR005633. Ribosomal_L23/L25_N.
IPR013025. Ribosomal_L25/23.
PfamiView protein in Pfam
PF00276. Ribosomal_L23. 1 hit.
PF03939. Ribosomal_L23eN. 1 hit.
SUPFAMiSSF54189. SSF54189. 1 hit.
PROSITEiView protein in PROSITE
PS00050. RIBOSOMAL_L23. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA1A6X4_DROME
AccessioniPrimary (citable) accession number: A1A6X4
Entry historyiIntegrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: June 7, 2017
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.