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A1A3V1 (A1A3V1_BIFAA) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Beta-galactosidase PIRNR PIRNR001084
Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084
Gene names
Ordered Locus Names:BAD_1603
OrganismBifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) [Complete proteome] [HAMAP]
Taxonomic identifier367928 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium

Protein attributes

Sequence length692 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Ontologies

Keywords
   Molecular functionGlycosidase PIRNR PIRNR001084
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentbeta-galactosidase complex

Inferred from electronic annotation. Source: InterPro

   Molecular functionbeta-galactosidase activity

Inferred from electronic annotation. Source: EC

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1631Proton donor By similarity PIRSR PIRSR001084-1
Active site3221Nucleophile By similarity PIRSR PIRSR001084-1
Binding site1241Substrate By similarity PIRSR PIRSR001084-2
Binding site1621Substrate By similarity PIRSR PIRSR001084-2
Binding site3301Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
A1A3V1 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: 93222B9F254E86D7

FASTA69277,569
        10         20         30         40         50         60 
MTMNQRREHR WPRPLEGRRA RIWYGGDYNP DQWPEEVWDE DVRLMVKAGV NLVSVGIFSW 

        70         80         90        100        110        120 
AKIEPREDVY DFGWLDRIID NLGKAGIAVD LASATASPPM WLTQAHPEVL WKDYRGDVCQ 

       130        140        150        160        170        180 
PGARQHWRPT SPVFCEYALK LCRAMAEHYK DNPYVVAWHV GNEYGCHNRF DYSEDAERAF 

       190        200        210        220        230        240 
QDWCEERYGT IEAVNDAWGT AFWAQHLNDF SEIVPPRFIG DGNFMNPGKL LDFKRFSSDA 

       250        260        270        280        290        300 
LKSFYVAERD ALAEITPEKP LTTNFMVSAG GSVLDYDDWG GEVDFVSNDH YFIPGEAHLD 

       310        320        330        340        350        360 
ELAFSASLVD GISRKDPWFL MEHSTSAVNW RPINYRKEPG QLVRDSLAHV AMGADAVCYF 

       370        380        390        400        410        420 
QWRQSRSGAE KFHSAMLPHA GEDSQTFRDV CELGRDLGTL ADEGLLGTKL AKSSVAIVFD 

       430        440        450        460        470        480 
YESEWASEHT ATPTQNVHHI DEPLAWFRAL ADVGVTADVV PIRSNWDEYD VAILPSVYIL 

       490        500        510        520        530        540 
SEENTRRVRD YVANGGKLIA TYYTGISDER DHVWLGGYPG SIRDVVGVRI EEFAPMGSDW 

       550        560        570        580        590        600 
PGVPDHLDLD NGAVAHDIVD VIGSIGKDAK VLASFKDDPW TGMDGRPAIV SNPYGEGRSV 

       610        620        630        640        650        660 
YVGARLGRDG IARSLPMILE TLGVEVKDSS DPDLLRIERV DESTGARFTF LFNRTKEPVS 

       670        680        690 
MLVEGRPVVM SLADCAGATV TINPNGVLVV KQ

« Hide

References

[1]"Bifidobacterium adolescentis complete genome sequence."
Suzuki T., Tsuda Y., Kanou N., Inoue T., Kumazaki K., Nagano S., Hirai S., Tanaka K., Watanabe K.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 15703 / DSM 20083 / NCTC 11814 / E194a.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP009256 Genomic DNA. Translation: BAF40384.1.
RefSeqYP_910466.1. NC_008618.1.

3D structure databases

ProteinModelPortalA1A3V1.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1A3V1.

Protein family/group databases

CAZyGH42. Glycoside Hydrolase Family 42.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4557037.
GenomeReviewsGene locus BAD_1603 in contig AP009256_GR.
KEGGbad:BAD_1603.
NMPDRfig|1680.3.peg.1561.
PATRIC21102697. VBIBifAdo27973_1692.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1874.
HOGENOMHBG476453.
OMAPLAWFRA.
ProtClustDBCLSK2462116.

Family and domain databases

InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK12308.
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1A3V1_BIFAA
AccessionPrimary (citable) accession number: A1A3V1
Entry history
Integrated into UniProtKB/TrEMBL: January 23, 2007
Last sequence update: January 23, 2007
Last modified: January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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