A1A0P4 (A1A0P4_BIFAA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Name:	alr EMBL BAF39277.1
Ordered Locus Names:	BAD_0496

Organism

Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) [Complete proteome] [HAMAP]

Taxonomic identifier

367928 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium

Protein attributes

Sequence length	452 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS009006
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS009006
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS009006 RuleBase RU004247
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS009006
Molecular function	Isomerase SAAS SAAS009006 RuleBase RU000608
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1A0P4 [UniParc]. Last modified January 23, 2007. Version 1. Checksum: 88225C66FDD24785	FASTA	452	48,117
	10 20 30 40 50 60 MTLSATREWD FSSEQGKANY KAAQRRYPAQ AIVDLAALRD NMRHLVSVVG GPHSGTAVMG 70 80 90 100 110 120 IVKADAYGHG LVPAALAALA GGATWLGTAQ SHEALLLRKA GIGPDRCHIL TWVYSGAEVP 130 140 150 160 170 180 FDELVDNDID ISVGSLAGID GVAAAARRLG KTARVHVKVD SGFGRNGFTP AGFDAALAKL 190 200 210 220 230 240 VPLAKEGVLH IVGQWSHLAV ADAPDVPEFV ASTDMQVETF KDFTRRMEAA GIPPEIRHLA 250 260 270 280 290 300 NTAATLSRPE IHFELTRPGI GLYGYEADPA MGTPSTYSLK PAMTLQAQLG TVKDVEAGHG 310 320 330 340 350 360 ISYGRTYLTP SDTSTAIVPL GYADGIHRSA SGFDMEGAKH VTKPGGPVRV MTSEGPRLYR 370 380 390 400 410 420 VSGRVCMDQF ILDLHGSAAE LGIHEGDNVE LFGPGRGEDY AEPTADDWGH AADTISYEIF 430 440 450 TCLRNRIPRL YEHATDVLSA EDLAKLDPAS IL

References

[1]

"Bifidobacterium adolescentis complete genome sequence." Suzuki T., Tsuda Y., Kanou N., Inoue T., Kumazaki K., Nagano S., Hirai S., Tanaka K., Watanabe K. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 15703 / DSM 20083 / NCTC 11814 / E194a.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009256 Genomic DNA. Translation: BAF39277.1.
RefSeq	YP_909359.1. NC_008618.1.
3D structure databases
ProteinModelPortal	A1A0P4.
ModBase	Search...
Protein-protein interaction databases
STRING	A1A0P4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4557207.
GenomeReviews	Gene locus BAD_0496 in contig AP009256_GR.
KEGG	bad:BAD_0496.
NMPDR	fig|1680.3.peg.755.
PATRIC	21100299. VBIBifAdo27973_0535.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HBG712172.
OMA	EGTPVWV.
ProtClustDB	CLSK572926.
Family and domain databases
HAMAP	MF_01201. Ala_racemase. [Tree]
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Gene3D	G3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 1 hit.
KO	K01775.
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. Alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1A0P4_BIFAA

Accession

Primary (citable) accession number: A1A0P4

Entry history

Integrated into UniProtKB/TrEMBL:	January 23, 2007
Last sequence update:	January 23, 2007
Last modified:	January 25, 2012
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)