A1A088 (RL15_BIFAA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L15

Gene names

Name:	rplO
Ordered Locus Names:	BAD_0340

Organism

Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) [Complete proteome] [HAMAP]

Taxonomic identifier

367928 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium

Protein attributes

Sequence length	148 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity. HAMAP MF_01341_B
Subunit structure	Part of the 50S ribosomal subunit.
Sequence similarities	Belongs to the ribosomal protein L15P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 148	148	50S ribosomal protein L15 HAMAP MF_01341_B		PRO_1000054429

Sequences

	Sequence		Length	Mass (Da)
	A1A088 [UniParc]. Last modified January 23, 2007. Version 1. Checksum: F6B14D92E3BE26EC	FASTA	148	15,699
	10 20 30 40 50 60 MADILQMHDL KPAPGANKDR IRVGRGEGSK GKTSGRGDKG TKKRYQVRPG FEGGQLPLYM 70 80 90 100 110 120 RLPKLRGFKN PFKKEYQVVN VAVLAELFPQ GGEITVADLV AKGAVRNGFP VKVLGDGEVS 130 140 AAYTLKGVKA SASAKSKIEA AGGSISED

References

[1]

"Bifidobacterium adolescentis complete genome sequence." Suzuki T., Tsuda Y., Kanou N., Inoue T., Kumazaki K., Nagano S., Hirai S., Tanaka K., Watanabe K. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 15703 / DSM 20083 / NCTC 11814 / E194a.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009256 Genomic DNA. Translation: BAF39121.1.
RefSeq	YP_909203.1. NC_008618.1.
3D structure databases
ProteinModelPortal	A1A088.
ModBase	Search...
Protein-protein interaction databases
STRING	A1A088.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4556488.
GenomeReviews	Gene locus BAD_0340 in contig AP009256_GR.
KEGG	bad:BAD_0340.
NMPDR	fig|1680.3.peg.602.
PATRIC	21099941. VBIBifAdo27973_0364.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0200.
HOGENOM	HBG727142.
OMA	RKGRGHA.
ProtClustDB	PRK05592.
Family and domain databases
HAMAP	MF_01341_B. Ribosomal_L15_B. [Tree]
InterPro	IPR005749. Ribosomal_L15_bac-type. IPR021131. Ribosomal_L18e/L15P. [Graphical view]
KO	K02876.
PANTHER	PTHR12934. Ribosom_L15_bac. 1 hit.
Pfam	PF00828. Ribosomal_L18e. 1 hit. [Graphical view]
SUPFAM	SSF52080. Ribosomal_L18e/L15. 1 hit.
TIGRFAMs	TIGR01071. RplO_bact. 1 hit.
PROSITE	PS00475. RIBOSOMAL_L15. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL15_BIFAA

Accession

Primary (citable) accession number: A1A088

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	January 23, 2007
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program