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A0ZZ85 (NU4C_GOSBA) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
NAD(P)H-quinone oxidoreductase chain 4, chloroplastic

EC=1.6.5.-
Alternative name(s):
NAD(P)H dehydrogenase, chain 4
NADH-plastoquinone oxidoreductase chain 4
Gene names
Name:ndhD
Encoded onPlastid; Chloroplast
OrganismGossypium barbadense (Sea-island cotton) (Egyptian cotton)
Taxonomic identifier3634 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsMalvalesMalvaceaeMalvoideaeGossypium

Protein attributes

Sequence length500 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

NAD(P)H + plastoquinone = NAD(P)+ + plastoquinol. HAMAP-Rule MF_00491

Subcellular location

Plastidchloroplast thylakoid membrane; Multi-pass membrane protein Potential HAMAP-Rule MF_00491.

Sequence similarities

Belongs to the complex I subunit 4 family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 500500NAD(P)H-quinone oxidoreductase chain 4, chloroplastic HAMAP-Rule MF_00491
PRO_0000275909

Regions

Transmembrane4 – 2421Helical; Potential
Transmembrane31 – 5121Helical; Potential
Transmembrane87 – 10721Helical; Potential
Transmembrane113 – 13018Helical; Potential
Transmembrane134 – 15421Helical; Potential
Transmembrane167 – 18721Helical; Potential
Transmembrane208 – 22821Helical; Potential
Transmembrane242 – 26221Helical; Potential
Transmembrane272 – 29221Helical; Potential
Transmembrane305 – 32521Helical; Potential
Transmembrane330 – 35021Helical; Potential
Transmembrane386 – 40621Helical; Potential
Transmembrane416 – 43621Helical; Potential
Transmembrane462 – 48221Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
A0ZZ85 [UniParc].

Last modified January 23, 2007. Version 1.
Checksum: D4AC0EA2333E00C8

FASTA50056,263
        10         20         30         40         50         60 
MNYFPWLTII VFLPISAGSL LFFLPHKGNK LIKWYTICIC ILELLLTTYA FCYHFRLDDP 

        70         80         90        100        110        120 
LIQLAEDYKW INFFDFYWRL GIDGLSIGPI LLTGFITTLA TLAAWPVTRD SRLFHFLMLA 

       130        140        150        160        170        180 
MYSGQIGSFS SRDLLLFFIM WEFELIPVYL LLSMWGGKKR LYSATKFILY TAGGSVFLLI 

       190        200        210        220        230        240 
GVLGLGLYGS NEPTLNFETL ANQSYPVALE IIFYIGFLIA FAVKSPIIPL HTWLPDTHGE 

       250        260        270        280        290        300 
AHYSTCMLLA GILLKMGAYG LVRINMELLP HAHSIFSPWL IIVGTMQIIY AASTSLGQRN 

       310        320        330        340        350        360 
LKKRIAYSSV SHMGFIIIGI GSITDTGLNG AILQIISHGF IGAALFFLAG TSYDRMRLVY 

       370        380        390        400        410        420 
LDEMGGMAVS IPKIFTMFSI LSMASLALPG MSGFVAELIV FFGIITSQKY FLMPKILITF 

       430        440        450        460        470        480 
VMAIGMILTP IYSLSMSRQM FYGYKLFNAP SSYFFDSGPR ELFVSISIFL PVIGIGIYPD 

       490        500 
FVLSLSGEKV ETILYNYFYR 

« Hide

References

[1]"Complete nucleotide sequence of the cotton (Gossypium barbadense L.) chloroplast genome with a comparative analysis of sequences among 9 dicot plants."
Ibrahim R.I.H., Azuma J., Sakamoto M.
Genes Genet. Syst. 81:311-321(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP009123 Genomic DNA. Translation: BAF41297.1.
RefSeqYP_913236.1. NC_008641.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4575197.

Family and domain databases

HAMAPMF_00491. NDH1_NuoM.
InterProIPR022997. NADH_Q_OxRdtase_chain4.
IPR010227. NADH_Q_OxRdtase_chainM/4.
IPR001750. NADH_UbQ/plastoQ_OxRdtase.
IPR003918. NADH_UbQ_OxRdtase.
[Graphical view]
PfamPF00361. Oxidored_q1. 1 hit.
[Graphical view]
PRINTSPR01437. NUOXDRDTASE4.
TIGRFAMsTIGR01972. NDH_I_M. 1 hit.
ProtoNetSearch...

Entry information

Entry nameNU4C_GOSBA
AccessionPrimary (citable) accession number: A0ZZ85
Entry history
Integrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: January 23, 2007
Last modified: May 14, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families