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Protein

30S ribosomal protein S18, chloroplastic

Gene

rps18

Organism
Thalassiosira pseudonana (Marine diatom) (Cyclotella nana)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S18, chloroplasticUniRule annotation
Gene namesi
Name:rps18UniRule annotation
Encoded oniPlastid; Chloroplast
OrganismiThalassiosira pseudonana (Marine diatom) (Cyclotella nana)
Taxonomic identifieri35128 [NCBI]
Taxonomic lineageiEukaryotaStramenopilesBacillariophytaCoscinodiscophyceaeThalassiosirophycidaeThalassiosiralesThalassiosiraceaeThalassiosira
Proteomesi
  • UP000001449 Componenti: Chloroplast

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002768981 – 7230S ribosomal protein S18, chloroplasticAdd BLAST72

Proteomic databases

PRIDEiA0T0R4.

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.

Protein-protein interaction databases

STRINGi35128.Thapsdraft1251.

Structurei

3D structure databases

ProteinModelPortaliA0T0R4.
SMRiA0T0R4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bS18 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3162. Eukaryota.
COG0238. LUCA.
HOGENOMiHOG000218466.
InParanoidiA0T0R4.

Family and domain databases

Gene3Di4.10.640.10. 1 hit.
HAMAPiMF_00270. Ribosomal_S18. 1 hit.
InterProiView protein in InterPro
IPR001648. Ribosomal_S18.
IPR018275. Ribosomal_S18_CS.
IPR036870. Ribosomal_S18_sf.
PfamiView protein in Pfam
PF01084. Ribosomal_S18. 1 hit.
PRINTSiPR00974. RIBOSOMALS18.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002239. Ribosomal_S18. 1 hit.
SUPFAMiSSF46911. SSF46911. 1 hit.
TIGRFAMsiTIGR00165. S18. 1 hit.
PROSITEiView protein in PROSITE
PS00057. RIBOSOMAL_S18. 1 hit.

Sequencei

Sequence statusi: Complete.

A0T0R4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLAQKQKLAP IGINQKIDYK DIDLLKLFIT EQGKILPRRA TGVTVQQQRQ
60 70
LAKAIKRARI LSLLPFVASN EL
Length:72
Mass (Da):8,155
Last modified:January 9, 2007 - v1
Checksum:i310FEF9BD5716BAA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF067921 Genomic DNA. Translation: ABK20749.1.
RefSeqiYP_874526.1. NC_008589.1.

Genome annotation databases

GeneIDi4524732.

Similar proteinsi

Entry informationi

Entry nameiRR18_THAPS
AccessioniPrimary (citable) accession number: A0T0R4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: January 9, 2007
Last modified: October 25, 2017
This is version 48 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families