Unreviewed,
UniProtKB/TrEMBL A0SZW2 (A0SZW2_RAT)
Last modified
November 3, 2009.
Version 27.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: CD40 ligand CD154 EMBL ABK59325.1 Submitted name: CD40 ligand EMBL EDL75129.1 | ||||
| Gene names |
| ||||
| Organism | Rattus norvegicus (Rat) EMBL ABK59325.1 | ||||
| Taxonomic identifier | 10116 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus |
Protein attributes
| Sequence length | 260 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
Ontologies
| Gene Ontology (GO) | |
|---|---|
| Biological process | B cell differentiation Inferred from electronic annotation. Source: Compara immunoglobulin secretionInferred from electronic annotation. Source: Compara isotype switchingInferred from electronic annotation. Source: Compara regulation of immunoglobulin secretionInferred from electronic annotation. Source: Compara |
| Cellular component | membrane Inferred from electronic annotation. Source: InterPro |
| Molecular function | tumor necrosis factor receptor binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
Cross-references
Sequence databases | |
|---|---|
| EF066490 mRNA. Translation: ABK59325.1. CH474106 Genomic DNA. Translation: EDL75129.1. | |
| IPI | IPI00210301. |
| UniGene | Rn.44218 |
3D structure databases | |
| SMR | A0SZW2. Positions 115-260. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | A0SZW2. |
Genome annotation databases | |
| Ensembl | ENSRNOT00000001162; ENSRNOP00000001162; ENSRNOG00000000871; Rattus norvegicus. [Genome view] |
| NMPDR | fig|10116.3.peg.32330. |
Phylogenomic databases | |
| HOVERGEN | A0SZW2. |
| OMA | KIFMYLL. |
Gene expression databases | |
| Genevestigator | A0SZW2. |
Family and domain databases | |
| InterPro | IPR003263. TNF_5. IPR006052. TNF_family. IPR008983. Tumour_necrosis_fac-like. [Graphical view] |
| Gene3D | G3DSA:2.60.120.40. Tumour_necrosis_fac-like. 1 hit. |
| Pfam | PF00229. TNF. 1 hit. [Graphical view] |
| PIRSF | PIRSF016527. TNF_5. 1 hit. |
| PRINTS | PR01702. CD40LIGAND. |
| ProDom | PD002012. TNF_subf. 1 hit. [Graphical view] [Entries sharing at least one domain] |
| SMART | SM00207. TNF. 1 hit. [Graphical view] |
| PROSITE | PS00251. TNF_1. 1 hit. PS50049. TNF_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | A0SZW2_RAT | ||||||||
| Accession | Primary (citable) accession number: A0SZW2 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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