A0RUV5 (A0RUV5_CENSY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Pyruvoyl-dependent arginine decarboxylase HAMAP MF_01404
Short name=PvlArgDC HAMAP MF_01404
EC=4.1.1.19 HAMAP MF_01404

Gene names

Name:	pdaD HAMAP MF_01404
Ordered Locus Names:	CENSYa_0488

Organism

Cenarchaeum symbiosum (strain A)

Taxonomic identifier

414004 [NCBI]

Taxonomic lineage

Archaea › Thaumarchaeota › Cenarchaeales › Cenarchaeaceae › Cenarchaeum

Protein attributes

Sequence length	188 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-arginine = agmatine + CO2. HAMAP MF_01404
Cofactor	Pyruvoyl group By similarity. HAMAP MF_01404
Sequence similarities	Belongs to the pdaD family. HAMAP MF_01404

Ontologies

Keywords
Ligand	Pyruvate HAMAP MF_01404
Molecular function	Decarboxylase HAMAP MF_01404 Lyase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	arginine catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	arginine decarboxylase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Site	48 – 49	2	Cleavage (non-hydrolytic) By similarity HAMAP MF_01404
Amino acid modifications
	Modified residue	49	1	Pyruvic acid (Ser) By similarity HAMAP MF_01404

Sequences

	Sequence		Length	Mass (Da)
	A0RUV5 [UniParc]. Last modified January 9, 2007. Version 1. Checksum: 2748B5500FDB2035	FASTA	188	20,837
	10 20 30 40 50 60 MTDLELLDLV AKKLFLTKGK GVHEDKLTSF EYALRDAGIS GTNLVLISSI FPPKAKLVPK 70 80 90 100 110 120 SEGLKLIRHG QILFTIYSKN QTSEPHRLVA ASVGVARPKD PDRYGYLSEY ESFGQSEKTA 130 140 150 160 170 180 GDYAEDVSAQ MLASSLGIPF DIDKSWDEKR QQWNISGEIY KTQNITQTAV GNKDGKWTTV FAAACLLF

References

[1]

"Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum." Hallam S.J., Konstantinidis K.T., Putnam N., Schleper C., Watanabe Y., Sugahara J., Preston C., de la Torre J., Richardson P.M., DeLong E.F. Proc. Natl. Acad. Sci. U.S.A. 103:18296-18301(2006) [PubMed: 17114289] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: A.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DP000238 Genomic DNA. Translation: ABK77122.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
HOGENOM	HBG539680.
OMA	YKMSGKI.
Family and domain databases
HAMAP	MF_01404. PvlArgDC. [Tree]
InterPro	IPR016104. Pyr-dep_his/arg-deCO2ase. IPR016105. Pyr-dep_his/arg-deCO2ase_sand. IPR002724. Pyruvoyl-dep_arg_deCO2ase. [Graphical view]
Gene3D	G3DSA:3.50.20.10. Pyr-dep_his/arg-deCO2ase_sand. 1 hit.
Pfam	PF01862. PvlArgDC. 1 hit. [Graphical view]
PIRSF	PIRSF005216. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
ProDom	PD010449. Pyruvoyl-dep_arg_deCO2ase. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF56271. His_carbxylase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A0RUV5_CENSY

Accession

Primary (citable) accession number: A0RUV5

Entry history

Integrated into UniProtKB/TrEMBL:	January 9, 2007
Last sequence update:	January 9, 2007
Last modified:	September 21, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)