A0RR75 (RIBA_CAMFF) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 37.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: GTP cyclohydrolase-2 EC=3.5.4.25 Alternative name(s): GTP cyclohydrolase II | ||||
| Gene names |
| ||||
| Organism | Campylobacter fetus subsp. fetus (strain 82-40) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 360106 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Campylobacteraceae › Campylobacter |
Protein attributes
| Sequence length | 195 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate By similarity. HAMAP MF_00179 |
| Catalytic activity | GTP + 3 H2O = formate + 2,5-diamino-6-hydroxy-4-(5-phospho-D-ribosylamino)pyrimidine + diphosphate. HAMAP MF_00179 |
| Cofactor | Binds 1 zinc ion per subunit By similarity. HAMAP MF_00179 |
| Pathway | Cofactor biosynthesis; riboflavin biosynthesis; 5-amino-6-(D-ribitylamino)uracil from GTP: step 1/4. HAMAP MF_00179 |
| Sequence similarities | Belongs to the GTP cyclohydrolase II family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Riboflavin biosynthesis |
| Ligand | GTP-binding Metal-binding Nucleotide-binding Zinc |
| Molecular function | Hydrolase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | riboflavin biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | GTP binding Inferred from electronic annotation. Source: UniProtKB-KW GTP cyclohydrolase II activityInferred from electronic annotation. Source: EC metal ion bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 195 | 195 | GTP cyclohydrolase-2 HAMAP MF_00179 | PRO_1000040557 | |||||
Regions | |||||||||
| Nucleotide binding | 48 – 52 | 5 | GTP By similarity | ||||||
| Nucleotide binding | 90 – 92 | 3 | GTP By similarity | ||||||
Sites | |||||||||
| Active site | 124 | 1 | Proton acceptor Potential | ||||||
| Active site | 126 | 1 | Nucleophile By similarity | ||||||
| Metal binding | 53 | 1 | Zinc; catalytic By similarity | ||||||
| Metal binding | 64 | 1 | Zinc; catalytic By similarity | ||||||
| Metal binding | 66 | 1 | Zinc; catalytic By similarity | ||||||
| Binding site | 69 | 1 | GTP By similarity | ||||||
| Binding site | 112 | 1 | GTP By similarity | ||||||
| Binding site | 147 | 1 | GTP By similarity | ||||||
| Binding site | 152 | 1 | GTP By similarity | ||||||
Sequences
| ||||||||||||||||||
References
| [1] | "Sequence of Campylobacter fetus subsp. fetus 82-40." Fouts D.E., Nelson K.E. Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 82-40. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000487 Genomic DNA. Translation: ABK81791.1. |
| RefSeq | YP_892708.1. NC_008599.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | A0RR75. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 4538031. |
| GenomeReviews | Gene locus CFF8240_1575 in contig CP000487_GR. |
| KEGG | cff:CFF8240_1575. |
| NMPDR | fig|360106.5.peg.1507. |
| PATRIC | 20037668. VBICamFet25865_1535. |
| TIGR | CFF8240_1575. |
Phylogenomic databases | |
| eggNOG | COG0807. |
| HOGENOM | HBG735778. |
| OMA | KENDKEH. |
| ProtClustDB | PRK00393. |
Enzyme and pathway databases | |
| BioCyc | CFET360106:CFF8240_1575-MONOMER. |
Family and domain databases | |
| HAMAP | MF_00179. RibA. [Tree] |
| InterPro | IPR000926. GTP_CycHdrlaseII_RibA. [Graphical view] |
| KO | K01497. |
| Pfam | PF00925. GTP_cyclohydro2. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00505. RibA. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | RIBA_CAMFF | ||||||||
| Accession | Primary (citable) accession number: A0RR75 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with