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Protein

Putative phenylalanine aminotransferase

Gene

pat

Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

May catalyze the transamination reaction in phenylalanine biosynthesis.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Aminotransferase, Transferase

Keywords - Ligandi

Pyridoxal phosphate

Enzyme and pathway databases

BioCyciMSME246196:GJ4Y-6350-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative phenylalanine aminotransferaseUniRule annotation (EC:2.6.1.-UniRule annotation)
Gene namesi
Name:patUniRule annotation
Ordered Locus Names:MSMEG_6351, MSMEI_6185
OrganismiMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Taxonomic identifieri246196 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
Proteomesi
  • UP000006158 Componenti: Chromosome
  • UP000000757 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 361361Putative phenylalanine aminotransferasePRO_1000024496Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei215 – 2151N6-(pyridoxal phosphate)lysineUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi246196.MSMEG_6351.

Structurei

3D structure databases

ProteinModelPortaliA0R5X8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CIH. Bacteria.
COG0079. LUCA.
HOGENOMiHOG000288510.
KOiK00817.
OMAiAWVRRYP.
OrthoDBiPOG091H05S1.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
HAMAPiMF_01023. HisC_aminotrans_2. 1 hit.
MF_01513. Phe_aminotrans_2. 1 hit.
InterProiIPR001917. Aminotrans_II_pyridoxalP_BS.
IPR004839. Aminotransferase_I/II.
IPR005861. HisP_aminotrans.
IPR024892. Pat.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01141. hisC. 1 hit.
PROSITEiPS00599. AA_TRANSFER_CLASS_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0R5X8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIRLRAEMA DLPAYAPGKT VPGAIKIASN ETVHGPLPSV REAILKATDL
60 70 80 90 100
INRYPDNGYL DLRERLAKHV NFAPENISVG CGSVSLCQQL IQITSSVGDE
110 120 130 140 150
VLFAWRSFEI YPLQVRTAGA TPVAVALRDH THDLDAMLAA ITDRTRLIFV
160 170 180 190 200
CNPNNPTSTV VDPGELARFV AAVPPHILVV LDEAYVEYIR DGLLPDSLGL
210 220 230 240 250
VREHRNVVVL RTFSKAYGLA GLRVGYAVAD PEIVTALGKV YVPFSATSVS
260 270 280 290 300
QAAAIACLDA ADELLARTDA VVAERTRVSD ALRAAGYTLP PSQANFVWLP
310 320 330 340 350
LAERTLDFVA RAADNRIIVR PYGEDGVRVT IGAPHENDAF LDFAQRWIAP
360
GGAGPRTGDS A
Length:361
Mass (Da):38,871
Last modified:January 9, 2007 - v1
Checksum:i1E1851D681D311E4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000480 Genomic DNA. Translation: ABK70318.1.
CP001663 Genomic DNA. Translation: AFP42612.1.
RefSeqiWP_011731224.1. NZ_CP009494.1.
YP_890566.1. NC_008596.1.

Genome annotation databases

EnsemblBacteriaiABK70318; ABK70318; MSMEG_6351.
AFP42612; AFP42612; MSMEI_6185.
GeneIDi4535223.
KEGGimsb:LJ00_31400.
msg:MSMEI_6185.
msm:MSMEG_6351.
PATRICi18084937. VBIMycSme59918_6182.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000480 Genomic DNA. Translation: ABK70318.1.
CP001663 Genomic DNA. Translation: AFP42612.1.
RefSeqiWP_011731224.1. NZ_CP009494.1.
YP_890566.1. NC_008596.1.

3D structure databases

ProteinModelPortaliA0R5X8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi246196.MSMEG_6351.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK70318; ABK70318; MSMEG_6351.
AFP42612; AFP42612; MSMEI_6185.
GeneIDi4535223.
KEGGimsb:LJ00_31400.
msg:MSMEI_6185.
msm:MSMEG_6351.
PATRICi18084937. VBIMycSme59918_6182.

Phylogenomic databases

eggNOGiENOG4105CIH. Bacteria.
COG0079. LUCA.
HOGENOMiHOG000288510.
KOiK00817.
OMAiAWVRRYP.
OrthoDBiPOG091H05S1.

Enzyme and pathway databases

BioCyciMSME246196:GJ4Y-6350-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
HAMAPiMF_01023. HisC_aminotrans_2. 1 hit.
MF_01513. Phe_aminotrans_2. 1 hit.
InterProiIPR001917. Aminotrans_II_pyridoxalP_BS.
IPR004839. Aminotransferase_I/II.
IPR005861. HisP_aminotrans.
IPR024892. Pat.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01141. hisC. 1 hit.
PROSITEiPS00599. AA_TRANSFER_CLASS_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiPATR_MYCS2
AccessioniPrimary (citable) accession number: A0R5X8
Secondary accession number(s): I7GAM4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 9, 2007
Last modified: September 7, 2016
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.