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Protein

Recombination protein RecR

Gene

recR

Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri56 – 7116C4-typeUniRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

DNA damage, DNA recombination, DNA repair

Keywords - Ligandi

Metal-binding, Zinc

Enzyme and pathway databases

BioCyciMSME246196:GJ4Y-6278-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Recombination protein RecRUniRule annotation
Gene namesi
Name:recRUniRule annotation
Ordered Locus Names:MSMEG_6279, MSMEI_6115
OrganismiMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Taxonomic identifieri246196 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
Proteomesi
  • UP000006158 Componenti: Chromosome
  • UP000000757 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 203203Recombination protein RecRPRO_0000322912Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi246196.MSMEG_6279.

Structurei

3D structure databases

ProteinModelPortaliA0R5R0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini79 – 179101ToprimUniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the RecR family.UniRule annotation
Contains 1 Toprim domain.UniRule annotation

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri56 – 7116C4-typeUniRule annotationAdd
BLAST

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiENOG4105F3K. Bacteria.
COG0353. LUCA.
HOGENOMiHOG000103272.
KOiK06187.
OMAiDVMAIEN.
OrthoDBiPOG091H01SF.

Family and domain databases

Gene3Di3.40.50.140. 1 hit.
HAMAPiMF_00017. RecR. 1 hit.
InterProiIPR000093. DNA_Rcmb_RecR.
IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR023627. Rcmb_RecR.
IPR023628. Rcmb_RecR_C4-type_Zn.
IPR015967. Rcmb_RecR_CS.
IPR006171. Toprim_domain.
[Graphical view]
PfamiPF02132. RecR. 1 hit.
PF13662. Toprim_4. 1 hit.
[Graphical view]
SMARTiSM00278. HhH1. 1 hit.
SM00493. TOPRIM. 1 hit.
[Graphical view]
SUPFAMiSSF111304. SSF111304. 1 hit.
TIGRFAMsiTIGR00615. recR. 1 hit.
PROSITEiPS01300. RECR. 1 hit.
PS50880. TOPRIM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0R5R0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFEGPVQDLI DELGKLPGIG PKSAQRIAFH LLSVEPPDID RLTAVLGRIR
60 70 80 90 100
DGVTFCSVCG NVSDEERCRI CSDPRRDASL VCVVEEPKDV QAVERTREFR
110 120 130 140 150
GRYHVLGGAL DPLSGIGPEQ LRIRELLNRI GERVEGVDVA EVIIATDPNT
160 170 180 190 200
EGEATATYLV RMLRDIPGLT VTRIASGLPM GGDLEFADEL TLGRALAGRR

AMV
Length:203
Mass (Da):22,102
Last modified:January 9, 2007 - v1
Checksum:iAEDC4512D7407144
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000480 Genomic DNA. Translation: ABK76091.1.
CP001663 Genomic DNA. Translation: AFP42546.1.
RefSeqiWP_003897699.1. NZ_CP009494.1.
YP_890498.1. NC_008596.1.

Genome annotation databases

EnsemblBacteriaiABK76091; ABK76091; MSMEG_6279.
AFP42546; AFP42546; MSMEI_6115.
GeneIDi4536974.
KEGGimsb:LJ00_31040.
msg:MSMEI_6115.
msm:MSMEG_6279.
PATRICi18084797. VBIMycSme59918_6116.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000480 Genomic DNA. Translation: ABK76091.1.
CP001663 Genomic DNA. Translation: AFP42546.1.
RefSeqiWP_003897699.1. NZ_CP009494.1.
YP_890498.1. NC_008596.1.

3D structure databases

ProteinModelPortaliA0R5R0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi246196.MSMEG_6279.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK76091; ABK76091; MSMEG_6279.
AFP42546; AFP42546; MSMEI_6115.
GeneIDi4536974.
KEGGimsb:LJ00_31040.
msg:MSMEI_6115.
msm:MSMEG_6279.
PATRICi18084797. VBIMycSme59918_6116.

Phylogenomic databases

eggNOGiENOG4105F3K. Bacteria.
COG0353. LUCA.
HOGENOMiHOG000103272.
KOiK06187.
OMAiDVMAIEN.
OrthoDBiPOG091H01SF.

Enzyme and pathway databases

BioCyciMSME246196:GJ4Y-6278-MONOMER.

Family and domain databases

Gene3Di3.40.50.140. 1 hit.
HAMAPiMF_00017. RecR. 1 hit.
InterProiIPR000093. DNA_Rcmb_RecR.
IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR023627. Rcmb_RecR.
IPR023628. Rcmb_RecR_C4-type_Zn.
IPR015967. Rcmb_RecR_CS.
IPR006171. Toprim_domain.
[Graphical view]
PfamiPF02132. RecR. 1 hit.
PF13662. Toprim_4. 1 hit.
[Graphical view]
SMARTiSM00278. HhH1. 1 hit.
SM00493. TOPRIM. 1 hit.
[Graphical view]
SUPFAMiSSF111304. SSF111304. 1 hit.
TIGRFAMsiTIGR00615. recR. 1 hit.
PROSITEiPS01300. RECR. 1 hit.
PS50880. TOPRIM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRECR_MYCS2
AccessioniPrimary (citable) accession number: A0R5R0
Secondary accession number(s): I7GFL2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: January 9, 2007
Last modified: September 7, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.