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Protein

50S ribosomal protein L27

Gene

rpmA

Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciMSME246196:GJ4Y-4623-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L27UniRule annotation
Gene namesi
Name:rpmAUniRule annotation
Ordered Locus Names:MSMEG_4624, MSMEI_4507
OrganismiMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Taxonomic identifieri246196 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
Proteomesi
  • UP000006158 Componenti: Chromosome
  • UP000000757 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 888850S ribosomal protein L27PRO_1000017519Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi246196.MSMEG_4624.

Structurei

3D structure databases

ProteinModelPortaliA0R150.
SMRiA0R150. Positions 1-84.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L27P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K46. Bacteria.
COG0211. LUCA.
HOGENOMiHOG000111610.
KOiK02899.
OMAiSYVSVIP.
OrthoDBiPOG091H01MP.

Family and domain databases

HAMAPiMF_00539. Ribosomal_L27. 1 hit.
InterProiIPR001684. Ribosomal_L27.
IPR018261. Ribosomal_L27_CS.
[Graphical view]
PANTHERiPTHR15893. PTHR15893. 1 hit.
PfamiPF01016. Ribosomal_L27. 1 hit.
[Graphical view]
PRINTSiPR00063. RIBOSOMALL27.
ProDomiPD003114. Ribosomal_L27. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00062. L27. 1 hit.
PROSITEiPS00831. RIBOSOMAL_L27. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0R150-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHKKGASSS RNGRDSAAQR LGVKRFGGQV VKAGEILVRQ RGTHFHPGVN
60 70 80
VGRGGDDTLF ALAPGAVEFG AKRGRKTVNI VPVARPEA
Length:88
Mass (Da):9,231
Last modified:January 9, 2007 - v1
Checksum:i6A0A308894E402CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000480 Genomic DNA. Translation: ABK73657.1.
CP001663 Genomic DNA. Translation: AFP40961.1.
RefSeqiWP_003896001.1. NZ_CP009494.1.
YP_888888.1. NC_008596.1.

Genome annotation databases

EnsemblBacteriaiABK73657; ABK73657; MSMEG_4624.
AFP40961; AFP40961; MSMEI_4507.
GeneIDi4531875.
KEGGimsb:LJ00_22870.
msg:MSMEI_4507.
msm:MSMEG_4624.
PATRICi18081561. VBIMycSme59918_4519.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000480 Genomic DNA. Translation: ABK73657.1.
CP001663 Genomic DNA. Translation: AFP40961.1.
RefSeqiWP_003896001.1. NZ_CP009494.1.
YP_888888.1. NC_008596.1.

3D structure databases

ProteinModelPortaliA0R150.
SMRiA0R150. Positions 1-84.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi246196.MSMEG_4624.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK73657; ABK73657; MSMEG_4624.
AFP40961; AFP40961; MSMEI_4507.
GeneIDi4531875.
KEGGimsb:LJ00_22870.
msg:MSMEI_4507.
msm:MSMEG_4624.
PATRICi18081561. VBIMycSme59918_4519.

Phylogenomic databases

eggNOGiENOG4105K46. Bacteria.
COG0211. LUCA.
HOGENOMiHOG000111610.
KOiK02899.
OMAiSYVSVIP.
OrthoDBiPOG091H01MP.

Enzyme and pathway databases

BioCyciMSME246196:GJ4Y-4623-MONOMER.

Family and domain databases

HAMAPiMF_00539. Ribosomal_L27. 1 hit.
InterProiIPR001684. Ribosomal_L27.
IPR018261. Ribosomal_L27_CS.
[Graphical view]
PANTHERiPTHR15893. PTHR15893. 1 hit.
PfamiPF01016. Ribosomal_L27. 1 hit.
[Graphical view]
PRINTSiPR00063. RIBOSOMALL27.
ProDomiPD003114. Ribosomal_L27. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00062. L27. 1 hit.
PROSITEiPS00831. RIBOSOMAL_L27. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL27_MYCS2
AccessioniPrimary (citable) accession number: A0R150
Secondary accession number(s): I7GCK9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 9, 2007
Last modified: September 7, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.