Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Cytidylate kinase

Gene

cmk

Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Catalytic activityi

ATP + (d)CMP = ADP + (d)CDP.UniRule annotationSAAS annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi11 – 199ATPUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

KinaseUniRule annotationSAAS annotationImported, Transferase

Keywords - Ligandi

ATP-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciMSME246196:GJ4Y-3738-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Cytidylate kinaseUniRule annotationSAAS annotation (EC:2.7.4.25UniRule annotationSAAS annotation)
Short name:
CKUniRule annotation
Alternative name(s):
Cytidine monophosphate kinaseUniRule annotation
Gene namesi
Name:cmkUniRule annotationImported
Ordered Locus Names:MSMEG_3739Imported, MSMEI_3649Imported
OrganismiMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)Imported
Taxonomic identifieri246196 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
Proteomesi
  • UP000006158 Componenti: Chromosome
  • UP000000757 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi246196.MSMEG_3739.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3R20X-ray2.00A2-228[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 220214Cytidylate_kinInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the cytidylate kinase family. Type 1 subfamily.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105CAT. Bacteria.
COG0283. LUCA.
HOGENOMiHOG000242850.
KOiK00945.
OMAiVRARRRY.
OrthoDBiPOG091H00RB.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00238. Cytidyl_kinase_type1. 1 hit.
InterProiIPR003136. Cytidylate_kin.
IPR011994. Cytidylate_kinase_dom.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF02224. Cytidylate_kin. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00017. cmk. 1 hit.

Sequencei

Sequence statusi: Complete.

A0QYQ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGSLVVAVD GPAGTGKSSV SRGLARALGA RYLDTGAMYR IATLAVLRAG
60 70 80 90 100
ADLTDPAAIE KAAADAEIGV GSDPDVDAAF LAGEDVSSEI RGDAVTGAVS
110 120 130 140 150
AVSAVPAVRT RLVDIQRKLA TEGGRVVVEG RDIGTVVLPD ADVKIFLTAS
160 170 180 190 200
AEERARRRNA QNVANGLPDD YATVLADVQR RDHLDSTRPV SPLRAADDAL
210 220
VVDTSDMDQA QVIAHLLDLV TAQAGARR
Length:228
Mass (Da):23,536
Last modified:January 9, 2007 - v1
Checksum:i475A7717297B1F29
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000480 Genomic DNA. Translation: ABK70875.1.
CP001663 Genomic DNA. Translation: AFP40111.1.
RefSeqiWP_011729300.1. NZ_CP009494.1.
YP_888038.1. NC_008596.1.

Genome annotation databases

EnsemblBacteriaiABK70875; ABK70875; MSMEG_3739.
AFP40111; AFP40111; MSMEI_3649.
GeneIDi4534682.
KEGGimsb:LJ00_18575.
msg:MSMEI_3649.
msm:MSMEG_3739.
PATRICi18079869. VBIMycSme59918_3680.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000480 Genomic DNA. Translation: ABK70875.1.
CP001663 Genomic DNA. Translation: AFP40111.1.
RefSeqiWP_011729300.1. NZ_CP009494.1.
YP_888038.1. NC_008596.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3R20X-ray2.00A2-228[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi246196.MSMEG_3739.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK70875; ABK70875; MSMEG_3739.
AFP40111; AFP40111; MSMEI_3649.
GeneIDi4534682.
KEGGimsb:LJ00_18575.
msg:MSMEI_3649.
msm:MSMEG_3739.
PATRICi18079869. VBIMycSme59918_3680.

Phylogenomic databases

eggNOGiENOG4105CAT. Bacteria.
COG0283. LUCA.
HOGENOMiHOG000242850.
KOiK00945.
OMAiVRARRRY.
OrthoDBiPOG091H00RB.

Enzyme and pathway databases

BioCyciMSME246196:GJ4Y-3738-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00238. Cytidyl_kinase_type1. 1 hit.
InterProiIPR003136. Cytidylate_kin.
IPR011994. Cytidylate_kinase_dom.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF02224. Cytidylate_kin. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00017. cmk. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA0QYQ0_MYCS2
AccessioniPrimary (citable) accession number: A0QYQ0
Entry historyi
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: September 7, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.