Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A0QV88 (A0QV88_MYCS2) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=2.6.1.19 EMBL ABK71148.1

Aminotransferase EMBL AFP38895.1
EC=2.6.1.19 EMBL AFP38895.1
Gene names
Ordered Locus Names:MSMEG_2487 EMBL ABK71148.1, MSMEI_2427 EMBL AFP38895.1
OrganismMycobacterium smegmatis (strain ATCC 700084 / mc(2)155) [Reference proteome] [HAMAP] EMBL ABK71148.1
Taxonomic identifier246196 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium

Protein attributes

Sequence length417 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
A0QV88 [UniParc].

Last modified January 9, 2007. Version 1.
Checksum: 28756732FA1A644D

FASTA41743,922
        10         20         30         40         50         60 
MTELSQALKQ ATGVIAARGE GVLLYDEQDR RYLDFTAGIG VTSTGHCHPR VVEAAQRQVG 

        70         80         90        100        110        120 
TLIHGQYTTV MHRPLLTLVE RLGEVLPAGL DRMFFANSGS EAIEAALRLS RQATGRPNVI 

       130        140        150        160        170        180 
VFHGGFHGRT VAAASMTTSG TKFRSGFSPL MAGVHVSPFP DPTHFGWPVE QTTDFALSQL 

       190        200        210        220        230        240 
DYVLQTVSAP ADTAAFFVEP VLGEGGYVPA NERFLAGLRE RADAHGILLV LDEVQTGYGR 

       250        260        270        280        290        300 
TGKFWGGEHF DAKPDILVTA KGLASGFPLS GIAASSELMA KAWPGSQGGT YGANAVACAA 

       310        320        330        340        350        360 
AIATLDVIAD ENLVANAAER GAQLKQALQT VADKHEQITD VRGLGLMIGN EFRDADGKPD 

       370        380        390        400        410 
GTTAAAVQQE AARRGLLLLT CGAWGQVVRF IPALVVSADE VEEAAGIWAD AVSAVVS 

« Hide

References

« Hide 'large scale' references
[1]"ICDS database: interrupted CoDing sequences in prokaryotic genomes."
Perrodou E., Deshayes C., Muller J., Schaeffer C., Van Dorsselaer A., Ripp R., Poch O., Reyrat J.M., Lecompte O.
Nucleic Acids Res. 34:D338-D343(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MC2 155 EMBL AFP38895.1.
[2]Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C., Fraser C.M.
Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700084 / mc(2)155 and MC2 155 EMBL ABK71148.1.
[3]"Interrupted coding sequences in Mycobacterium smegmatis: authentic mutations or sequencing errors?"
Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C., Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.M.
Genome Biol. 8:R20.1-R20.9(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700084 / mc(2)155 and MC2 155 EMBL AFP38895.1.
[4]"Ortho-proteogenomics: multiple proteomes investigation through orthology and a new MS-based protocol."
Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.M., Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.
Genome Res. 19:128-135(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700084 / mc(2)155 and MC2 155.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000480 Genomic DNA. Translation: ABK71148.1.
CP001663 Genomic DNA. Translation: AFP38895.1.
RefSeqYP_006567190.1. NC_018289.1.
YP_886826.1. NC_008596.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING246196.MSMEG_2487.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABK71148; ABK71148; MSMEG_2487.
AFP38895; AFP38895; MSMEI_2427.
GeneID4533529.
KEGGmsg:MSMEI_2427.
msm:MSMEG_2487.
PATRIC18077400. VBIMycSme59918_2452.

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK00823.
OMAQNDLAMA.
OrthoDBEOG6QVRHN.

Enzyme and pathway databases

BioCycMSME246196:GJ4Y-2487-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA0QV88_MYCS2
AccessionPrimary (citable) accession number: A0QV88
Entry history
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: July 9, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)