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A0QV88

- A0QV88_MYCS2

UniProt

A0QV88 - A0QV88_MYCS2

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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

MSMEG_2487

Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciMSME246196:GJ4Y-2487-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
Submitted name:
AminotransferaseImported (EC:2.6.1.19Imported)
Gene namesi
Ordered Locus Names:MSMEG_2487Imported, MSMEI_2427Imported
OrganismiMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)Imported
Taxonomic identifieri246196 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000006158: Chromosome, UP000000757: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi246196.MSMEG_2487.

Structurei

3D structure databases

ProteinModelPortaliA0QV88.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiQNDLAMA.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0QV88-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTELSQALKQ ATGVIAARGE GVLLYDEQDR RYLDFTAGIG VTSTGHCHPR
60 70 80 90 100
VVEAAQRQVG TLIHGQYTTV MHRPLLTLVE RLGEVLPAGL DRMFFANSGS
110 120 130 140 150
EAIEAALRLS RQATGRPNVI VFHGGFHGRT VAAASMTTSG TKFRSGFSPL
160 170 180 190 200
MAGVHVSPFP DPTHFGWPVE QTTDFALSQL DYVLQTVSAP ADTAAFFVEP
210 220 230 240 250
VLGEGGYVPA NERFLAGLRE RADAHGILLV LDEVQTGYGR TGKFWGGEHF
260 270 280 290 300
DAKPDILVTA KGLASGFPLS GIAASSELMA KAWPGSQGGT YGANAVACAA
310 320 330 340 350
AIATLDVIAD ENLVANAAER GAQLKQALQT VADKHEQITD VRGLGLMIGN
360 370 380 390 400
EFRDADGKPD GTTAAAVQQE AARRGLLLLT CGAWGQVVRF IPALVVSADE
410
VEEAAGIWAD AVSAVVS
Length:417
Mass (Da):43,922
Last modified:January 9, 2007 - v1
Checksum:i28756732FA1A644D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000480 Genomic DNA. Translation: ABK71148.1.
CP001663 Genomic DNA. Translation: AFP38895.1.
RefSeqiWP_011728377.1. NC_018289.1.
YP_006567190.1. NC_018289.1.
YP_886826.1. NC_008596.1.

Genome annotation databases

EnsemblBacteriaiABK71148; ABK71148; MSMEG_2487.
AFP38895; AFP38895; MSMEI_2427.
GeneIDi4533529.
KEGGimsm:MSMEG_2487.
PATRICi18077400. VBIMycSme59918_2452.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000480 Genomic DNA. Translation: ABK71148.1 .
CP001663 Genomic DNA. Translation: AFP38895.1 .
RefSeqi WP_011728377.1. NC_018289.1.
YP_006567190.1. NC_018289.1.
YP_886826.1. NC_008596.1.

3D structure databases

ProteinModelPortali A0QV88.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 246196.MSMEG_2487.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABK71148 ; ABK71148 ; MSMEG_2487 .
AFP38895 ; AFP38895 ; MSMEI_2427 .
GeneIDi 4533529.
KEGGi msm:MSMEG_2487.
PATRICi 18077400. VBIMycSme59918_2452.

Phylogenomic databases

eggNOGi COG0160.
HOGENOMi HOG000020206.
KOi K00823.
OMAi QNDLAMA.
OrthoDBi EOG6QVRHN.

Enzyme and pathway databases

BioCyci MSME246196:GJ4Y-2487-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
PANTHERi PTHR11986. PTHR11986. 1 hit.
Pfami PF00202. Aminotran_3. 1 hit.
[Graphical view ]
PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMi SSF53383. SSF53383. 1 hit.
PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MC2 155Imported.
  2. Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C., Fraser C.M.
    Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700084 / mc(2)155 and MC2 155Imported.
  3. "Interrupted coding sequences in Mycobacterium smegmatis: authentic mutations or sequencing errors?"
    Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C., Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.
    Genome Biol. 8:R20.1-R20.9(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700084 / mc(2)155Imported and MC2 155Imported.
  4. "Ortho-proteogenomics: multiple proteomes investigation through orthology and a new MS-based protocol."
    Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M., Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.
    Genome Res. 19:128-135(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700084 / mc(2)155 and MC2 155.

Entry informationi

Entry nameiA0QV88_MYCS2
AccessioniPrimary (citable) accession number: A0QV88
Entry historyi
Integrated into UniProtKB/TrEMBL: January 9, 2007
Last sequence update: January 9, 2007
Last modified: November 26, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3