A0QV20 (A0QV20_MYCS2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonuclease III EMBL ABK72959.1
EC=3.1.26.3 EMBL ABK72959.1

Gene names

Name:	rnc EMBL ABK72959.1
Ordered Locus Names:	MSMEG_2418

Organism

Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) EMBL ABK72959.1

Taxonomic identifier

246196 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium

Protein attributes

Sequence length	230 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABK72959.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	RNA processing Inferred from electronic annotation. Source: InterPro rRNA catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	double-stranded RNA binding Inferred from electronic annotation. Source: InterPro ribonuclease III activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0QV20 [UniParc]. Last modified January 9, 2007. Version 1. Checksum: 4AAF4F9CCCFC5BFC	FASTA	230	24,205
	10 20 30 40 50 60 MTDSHAALLE ALGVALPAEL LTIALTHRSY SYENGGLPTN ERLEFLGDAV LGLTITEELY 70 80 90 100 110 120 HRHPDRAEGD LAKLRASIVN TQALADVGRG LTDEGLGAHL FLGKGEENSG GADKSSILAD 130 140 150 160 170 180 GVESLLGAIY LEHGLTVVRE VILRLFGELL DTAPTLGAGL DWKSSLQELT AARGLGAPAY 190 200 210 220 230 VVTSTGPDHD KEFSATVVIG EAEYGHGVGR TKKEAELKAA ASAYKTLDES

References

[1]	Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C., Fraser C.M. Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700084 / mc(2)155.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000480 Genomic DNA. Translation: ABK72959.1.
RefSeq	YP_886758.1. NC_008596.1.
3D structure databases
ProteinModelPortal	A0QV20.
SMR	A0QV20. Positions 4-155.
ModBase	Search...
Protein-protein interaction databases
STRING	A0QV20.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBMYCT00000044107; EBMYCP00000042444; EBMYCG00000044102.
GeneID	4531140.
GenomeReviews	Gene locus MSMEG_2418 in contig CP000480_GR.
KEGG	msm:MSMEG_2418.
NMPDR	fig|246196.1.peg.2416.
PATRIC	18077262. VBIMycSme59918_2383.
TIGR	MSMEG_2418.
Phylogenomic databases
eggNOG	COG0571.
GeneTree	EBGT00050000017732.
HOGENOM	HBG744556.
OMA	ALTHKSF.
PhylomeDB	A0QV20.
ProtClustDB	PRK00102.
Family and domain databases
HAMAP	MF_00104. RNase_III. [Tree]
InterPro	IPR001159. Ds-RNA-bd. IPR014720. dsRNA-bd-like. IPR000999. RNase_III. IPR011907. RNase_III_bac. [Graphical view]
Gene3D	G3DSA:3.30.160.20. dsRNA-bd-like. 1 hit. G3DSA:1.10.1520.10. RNase_III. 1 hit.
KO	K03685.
PANTHER	PTHR11207. PTHR11207. 1 hit.
Pfam	PF00035. dsrm. 1 hit. PF00636. Ribonuclease_3. 1 hit. [Graphical view]
SMART	SM00358. DSRM. 1 hit. SM00535. RIBOc. 1 hit. [Graphical view]
SUPFAM	SSF69065. RNase_III. 1 hit.
TIGRFAMs	TIGR02191. RNaseIII. 1 hit.
PROSITE	PS50137. DS_RBD. 1 hit. PS00517. RNASE_3_1. 1 hit. PS50142. RNASE_3_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0QV20_MYCS2

Accession

Primary (citable) accession number: A0QV20

Entry history

Integrated into UniProtKB/TrEMBL:	January 9, 2007
Last sequence update:	January 9, 2007
Last modified:	January 25, 2012
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)