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Protein

30S ribosomal protein S9

Gene

rpsI

Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S9UniRule annotation
Gene namesi
Name:rpsIUniRule annotation
Ordered Locus Names:MSMEG_1557, MSMEI_1520
OrganismiMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Taxonomic identifieri246196 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
Proteomesi
  • UP000006158 Componenti: Chromosome
  • UP000000757 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_10000512592 – 15030S ribosomal protein S9Add BLAST149

Interactioni

Protein-protein interaction databases

STRINGi246196.MSMEG_1557.

Structurei

Secondary structure

1150
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi28 – 31Combined sources4
Beta strandi33 – 46Combined sources14
Beta strandi48 – 53Combined sources6
Turni55 – 57Combined sources3
Helixi62 – 75Combined sources14
Beta strandi82 – 90Combined sources9
Helixi92 – 110Combined sources19
Helixi112 – 114Combined sources3
Helixi115 – 118Combined sources4
Turni119 – 124Combined sources6
Beta strandi138 – 140Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5O5Jelectron microscopy3.45I1-150[»]
5O61electron microscopy3.31BI1-150[»]
5XYUelectron microscopy3.45I1-150[»]
ProteinModelPortaliA0QSP9.
SMRiA0QSP9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS9 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UJD. Bacteria.
COG0103. LUCA.
HOGENOMiHOG000019802.
KOiK02996.
OMAiMVERKKF.
OrthoDBiPOG091H02AY.

Family and domain databases

Gene3Di3.30.230.10. 1 hit.
HAMAPiMF_00532_B. Ribosomal_S9_B. 1 hit.
InterProiView protein in InterPro
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR000754. Ribosomal_S9.
IPR023035. Ribosomal_S9_bac/plastid.
IPR020574. Ribosomal_S9_CS.
PANTHERiPTHR21569. PTHR21569. 1 hit.
PfamiView protein in Pfam
PF00380. Ribosomal_S9. 1 hit.
SUPFAMiSSF54211. SSF54211. 1 hit.
PROSITEiView protein in PROSITE
PS00360. RIBOSOMAL_S9. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A0QSP9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDVTETEVV TESAEPREPV IIDRPIQTVG RRKEAVVRVR LVPGTGQFNL
60 70 80 90 100
DGRTLENYFP NKVHQQLIKA PLVTVDRVDQ FDIYAHLDGG GPSGQAGALR
110 120 130 140 150
LAIARALILV QPEDRPALKK AGFLTRDPRA IERKKYGLKK ARKAPQYSKR
Length:150
Mass (Da):16,765
Last modified:January 9, 2007 - v1
Checksum:i43D41988EB28EFFD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000480 Genomic DNA. Translation: ABK70660.1.
CP001663 Genomic DNA. Translation: AFP37993.1.
RefSeqiWP_003892945.1. NZ_CP009494.1.
YP_885937.1. NC_008596.1.

Genome annotation databases

EnsemblBacteriaiABK70660; ABK70660; MSMEG_1557.
AFP37993; AFP37993; MSMEI_1520.
GeneIDi4537298.
KEGGimsg:MSMEI_1520.
msm:MSMEG_1557.
PATRICifig|246196.19.peg.1543.

Similar proteinsi

Entry informationi

Entry nameiRS9_MYCS2
AccessioniPrimary (citable) accession number: A0QSP9
Secondary accession number(s): I7FGL4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 9, 2007
Last modified: November 22, 2017
This is version 71 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families