A0QRM0 (Y1165_MYCS2) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
UPF0234 protein MSMEG_1165

Gene names

Ordered Locus Names:

MSMEG_1165

Organism

Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Taxonomic identifier

246196 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium

Protein attributes

Sequence length	163 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the UPF0234 family.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Initiator methionine	1	1	Removed Ref.2
	Chain	2 – 163	162	UPF0234 protein MSMEG_1165 HAMAP MF_00632		PRO_1000051741

Sequences

	Sequence		Length	Mass (Da)
	A0QRM0 [UniParc]. Last modified January 9, 2007. Version 1. Checksum: B595123C959B9A35	FASTA	163	18,092
	10 20 30 40 50 60 MADSSFDVVS KVDRQEVDNA LNQAAKELAT RFDFRGTDTT IAWKGDEVIE LTSSTEERVK 70 80 90 100 110 120 AAVDVFKEKL VRRDISMKAF DAEDPQPSGK TYKVTGTIKQ GITSEQAKKI TKLIRDEGPK 130 140 150 160 GVKAQIQGDE IRVSSKKRDD LQAVIALLKG ADLDVALQFV NYR

References

[1]	Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C., Fraser C.M. Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700084 / mc(2)155.
[2]	"Ortho-proteogenomics: multiple proteomes investigation through orthology and a new MS-based protocol." Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M., Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O. Genome Res. 19:128-135(2009) [PubMed: 18955433] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS], CLEAVAGE OF INITIATOR METHIONINE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000480 Genomic DNA. Translation: ABK72830.1.
RefSeq	YP_885558.1. NC_008596.1.
3D structure databases
ProteinModelPortal	A0QRM0.
ModBase	Search...
Protein-protein interaction databases
STRING	A0QRM0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBMYCT00000047136; EBMYCP00000045473; EBMYCG00000047131.
GeneID	4532406.
GenomeReviews	Gene locus MSMEG_1165 in contig CP000480_GR.
KEGG	msm:MSMEG_1165.
PATRIC	18074799. VBIMycSme59918_1160.
TIGR	MSMEG_1165.
Phylogenomic databases
eggNOG	COG1666.
GeneTree	EBGT00050000017546.
HOGENOM	HBG290634.
OMA	LQFTNYR.
PhylomeDB	A0QRM0.
ProtClustDB	PRK05412.
Enzyme and pathway databases
BioCyc	MSME246196:MSMEG_1165-MONOMER.
Family and domain databases
HAMAP	MF_00632. UPF0234. [Tree]
InterPro	IPR007551. DUF520. [Graphical view]
KO	K09767.
Pfam	PF04461. DUF520. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y1165_MYCS2

Accession

Primary (citable) accession number: A0QRM0

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	January 9, 2007
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program