Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

DNA replication and repair protein RecF

Gene

recF

Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi30 – 37ATPSequence analysis8

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processDNA damage, DNA repair, DNA replication, SOS response
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciMSME246196:G1H7P-4-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
DNA replication and repair protein RecF
Gene namesi
Name:recF
Ordered Locus Names:MSMEG_0003, MSMEI_0005
OrganismiMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Taxonomic identifieri246196 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium fortuitum complex
Proteomesi
  • UP000006158 Componenti: Chromosome
  • UP000000757 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002936011 – 384DNA replication and repair protein RecFAdd BLAST384

Interactioni

Protein-protein interaction databases

STRINGi246196.MSMEG_0003

Structurei

3D structure databases

ProteinModelPortaliA0QND8
SMRiA0QND8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RecF family.Curated

Phylogenomic databases

eggNOGiENOG4105C3X Bacteria
COG1195 LUCA
HOGENOMiHOG000269561
KOiK03629
OMAiGQQKSFL
OrthoDBiPOG091H00U7

Family and domain databases

HAMAPiMF_00365 RecF, 1 hit
InterProiView protein in InterPro
IPR001238 DNA-binding_RecF
IPR018078 DNA-binding_RecF_CS
IPR027417 P-loop_NTPase
IPR003395 RecF/RecN/SMC_N
PANTHERiPTHR32182:SF0 PTHR32182:SF0, 1 hit
PfamiView protein in Pfam
PF02463 SMC_N, 1 hit
SUPFAMiSSF52540 SSF52540, 2 hits
TIGRFAMsiTIGR00611 recf, 1 hit
PROSITEiView protein in PROSITE
PS00617 RECF_1, 1 hit
PS00618 RECF_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0QND8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFARHLGLTD FRSWARVDLD LEPGRTVFVG PNGFGKTNLV EALWYSATLG
60 70 80 90 100
SHRVATDAPL IRAGAERAIV STIVVNEGRE LAVDLEITSG RANKARLNRS
110 120 130 140 150
PVRSAREILG VLRAVLFSPE DLSLVRGDPG DRRRYLDELA TTRRPALAGV
160 170 180 190 200
RADYDKVVRQ RTALLKTAAG ARYRGDRSVI DTLEVWDGHL AAHGAALVAS
210 220 230 240 250
RVKLVEELQP EVEKAYQLLA PASRPAAIRY RSSVEAIEDA PGPESVEFYE
260 270 280 290 300
AALLDALARR RDAELERGVC LVGPHRDDLE LRLGDQPAKG FASHGESWSM
310 320 330 340 350
ALALRLGAYE LLCSDGVEPV LLLDDVFAEL DTSRRRALAT VAGSAEQVLV
360 370 380
TAAVGEDIPE DWDARRVEIR MVEDDGGRVS MVAS
Length:384
Mass (Da):41,920
Last modified:January 9, 2007 - v1
Checksum:i1F2045B42BA73262
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000480 Genomic DNA Translation: ABK70100.1
CP001663 Genomic DNA Translation: AFP36490.1
X94224 Genomic DNA Translation: CAA63915.1
RefSeqiWP_011726603.1, NC_018289.1
YP_884426.1, NC_008596.1

Genome annotation databases

EnsemblBacteriaiABK70100; ABK70100; MSMEG_0003
AFP36490; AFP36490; MSMEI_0005
GeneIDi4532650
KEGGimsg:MSMEI_0005
msm:MSMEG_0003
PATRICifig|246196.19.peg.3

Similar proteinsi

Entry informationi

Entry nameiRECF_MYCS2
AccessioniPrimary (citable) accession number: A0QND8
Secondary accession number(s): I7F4B6, P50916
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: January 9, 2007
Last modified: May 23, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health