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Protein

30S ribosomal protein S7

Gene

rpsG

Organism
Mycobacterium avium (strain 104)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding, tRNA-binding

Enzyme and pathway databases

BioCyciMAVI243243:GH3Y-4491-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S7UniRule annotation
Gene namesi
Name:rpsGUniRule annotation
Ordered Locus Names:MAV_4491
OrganismiMycobacterium avium (strain 104)
Taxonomic identifieri243243 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium avium complex (MAC)

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 15615630S ribosomal protein S7PRO_1000014232Add
BLAST

Proteomic databases

PRIDEiA0QL37.

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliA0QL37.
SMRiA0QL37. Positions 10-148.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S7P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0049.
HOGENOMiHOG000039067.
KOiK02992.
OMAiTKFVNHL.
OrthoDBiEOG6P5ZKW.

Family and domain databases

Gene3Di1.10.455.10. 1 hit.
HAMAPiMF_00480_B. Ribosomal_S7_B.
InterProiIPR000235. Ribosomal_S5/S7.
IPR005717. Ribosomal_S7_bac/org-type.
IPR020606. Ribosomal_S7_CS.
IPR023798. Ribosomal_S7_dom.
[Graphical view]
PANTHERiPTHR11205. PTHR11205. 1 hit.
PfamiPF00177. Ribosomal_S7. 1 hit.
[Graphical view]
PIRSFiPIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAMiSSF47973. SSF47973. 1 hit.
TIGRFAMsiTIGR01029. rpsG_bact. 1 hit.
PROSITEiPS00052. RIBOSOMAL_S7. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0QL37-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRKGPAPKR PLVNDPVYGS QLVTQLVNKV LLKGKKSLAE RIVYGALENA
60 70 80 90 100
REKTGTDPVI TLKRALDNVK PALEVRSRRV GGATYQVPVE VRPDRSTTLA
110 120 130 140 150
LRWLVSFSRQ RREKTMVERL ANEILDASNG LGASVKRRED THKMAEANRA

FAHYRW
Length:156
Mass (Da):17,600
Last modified:January 9, 2007 - v1
Checksum:iFC21E2DF76C8A9C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000479 Genomic DNA. Translation: ABK69473.1.
RefSeqiWP_003873540.1. NC_008595.1.
YP_883625.1. NC_008595.1.

Genome annotation databases

EnsemblBacteriaiABK69473; ABK69473; MAV_4491.
GeneIDi2720846.
KEGGimav:MAV_4491.
PATRICi17990677. VBIMycAvi38287_4412.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000479 Genomic DNA. Translation: ABK69473.1.
RefSeqiWP_003873540.1. NC_008595.1.
YP_883625.1. NC_008595.1.

3D structure databases

ProteinModelPortaliA0QL37.
SMRiA0QL37. Positions 10-148.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiA0QL37.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK69473; ABK69473; MAV_4491.
GeneIDi2720846.
KEGGimav:MAV_4491.
PATRICi17990677. VBIMycAvi38287_4412.

Phylogenomic databases

eggNOGiCOG0049.
HOGENOMiHOG000039067.
KOiK02992.
OMAiTKFVNHL.
OrthoDBiEOG6P5ZKW.

Enzyme and pathway databases

BioCyciMAVI243243:GH3Y-4491-MONOMER.

Family and domain databases

Gene3Di1.10.455.10. 1 hit.
HAMAPiMF_00480_B. Ribosomal_S7_B.
InterProiIPR000235. Ribosomal_S5/S7.
IPR005717. Ribosomal_S7_bac/org-type.
IPR020606. Ribosomal_S7_CS.
IPR023798. Ribosomal_S7_dom.
[Graphical view]
PANTHERiPTHR11205. PTHR11205. 1 hit.
PfamiPF00177. Ribosomal_S7. 1 hit.
[Graphical view]
PIRSFiPIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAMiSSF47973. SSF47973. 1 hit.
TIGRFAMsiTIGR01029. rpsG_bact. 1 hit.
PROSITEiPS00052. RIBOSOMAL_S7. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C., Fraser C.M.
    Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 104.

Entry informationi

Entry nameiRS7_MYCA1
AccessioniPrimary (citable) accession number: A0QL37
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 9, 2007
Last modified: June 24, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.