A0QJ28 (A0QJ28_MYCA1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
30S ribosomal protein S2 HAMAP MF_00291

Gene names

Name:	rpsB HAMAP MF_00291 EMBL ABK66858.1
Ordered Locus Names:	MAV_3744

Organism

Mycobacterium avium (strain 104) [Complete proteome] [HAMAP]

Taxonomic identifier

243243 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium avium complex (MAC)

Protein attributes

Sequence length	276 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S2P family. HAMAP MF_00291 RuleBase RU003631

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_00291 RuleBase RU003631 EMBL ABK66858.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0QJ28 [UniParc]. Last modified January 9, 2007. Version 1. Checksum: 2D4B26DFA2927DC6	FASTA	276	30,153
	10 20 30 40 50 60 MAVVTMKQLL DSGTHFGHQT RRWNPKMKRF IFTDRNGIYI IDLQQTLTFI DKAYEFVKET 70 80 90 100 110 120 VAHGGTVLFV GTKKQAQESI AAEATRVGMP YVNQRWLGGM LTNFSTVHKR LQRLKELEAM 130 140 150 160 170 180 EQTGGFEGRT KKEILGLTRE KNKLERSLGG IRDMSKVPSA IWVVDTNKEH IAVGEARKLG 190 200 210 220 230 240 IPVIAILDTN CDPDEVDYPI PGNDDAIRSA ALLTKVIASA VAEGLQARAG VGRGDGKPEV 250 260 270 EAAEPLAEWE QELLASATAT AAPTEAGAPE PTTDPS

References

[1]	Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C., Fraser C.M. Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000479 Genomic DNA. Translation: ABK66858.1.
RefSeq	YP_882916.1. NC_008595.1.
3D structure databases
ProteinModelPortal	A0QJ28.
SMR	A0QJ28. Positions 6-228.
ModBase	Search...
Protein-protein interaction databases
STRING	A0QJ28.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBMYCT00000011207; EBMYCP00000011093; EBMYCG00000011205.
GeneID	4528369.
GenomeReviews	Gene locus MAV_3744 in contig CP000479_GR.
KEGG	mav:MAV_3744.
PATRIC	17989171. VBIMycAvi38287_3665.
TIGR	MAV_3744.
Phylogenomic databases
eggNOG	COG0052.
GeneTree	EBGT00050000017722.
HOGENOM	HBG736296.
OMA	KQAQDSV.
PhylomeDB	A0QJ28.
ProtClustDB	PRK05299.
Family and domain databases
HAMAP	MF_00291_B. Ribosomal_S2_B. [Tree]
InterPro	IPR001865. Ribosomal_S2. IPR005706. Ribosomal_S2_bac/mit/plastid. IPR018130. Ribosomal_S2_CS. IPR023591. Ribosomal_S2_flav_dom. [Graphical view]
KO	K02967.
PANTHER	PTHR12534. Ribosom_S2_bac. 1 hit.
Pfam	PF00318. Ribosomal_S2. 1 hit. [Graphical view]
PRINTS	PR00395. RIBOSOMALS2.
SUPFAM	SSF52313. Ribosomal_S2. 1 hit.
TIGRFAMs	TIGR01011. RpsB_bact. 1 hit.
PROSITE	PS00962. RIBOSOMAL_S2_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0QJ28_MYCA1

Accession

Primary (citable) accession number: A0QJ28

Entry history

Integrated into UniProtKB/TrEMBL:	January 9, 2007
Last sequence update:	January 9, 2007
Last modified:	December 14, 2011
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)